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Report for CCDS9367.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9367.1 Public Homo sapiens 13 STOML3 24 110 108 CCDS HistoryNCBI Gene:161003Re-query CCDS DB by CCDS ID:9367.1Re-query CCDS DB by GeneID:161003See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9367.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379631.9 ENSP00000368952.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379631.9Link to Ensembl Protein Viewer:ENSP00000368952.4Re-query CCDS DB by Nucleotide ID:ENST00000379631Re-query CCDS DB by Protein ID:ENSP00000368952
Original member Current member NCBI NM_145286.3 NP_660329.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145286.3Link to Protein Sequence:NP_660329.1Re-query CCDS DB by Nucleotide ID:NM_145286Re-query CCDS DB by Protein ID:NP_660329Link to BLAST:NP_660329.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660329.1 291 Q8TAV4-1 291 100% 0 0

Chromosomal Locations for CCDS 9367.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 38966825 38967049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38968400 38968534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38970185 38970388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38972512 38972594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38976540 38976612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38976694 38976797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 38990670 38990721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGGATTCTAGGGTGTCTTCACCTGAGAAGCAAGATAAAGAGAATTTCGTGGGTGTCAACAATAAACGGC
TTGGTGTATGTGGCTGGATCCTGTTTTCCCTCTCTTTCCTGTTGGTGATCATTACCTTCCCCATCTCCAT
ATGGATGTGCTTGAAGATCATTAAGGAGTATGAACGTGCTGTTGTATTCCGTCTGGGACGCATCCAAGCT
GACAAAGCCAAGGGGCCAGGTTTGATCCTGGTCCTGCCATGCATAGATGTGTTTGTCAAAGTTGACCTCC
GAACAGTTACTTGCAACATTCCTCCACAAGAGATCCTCACCAGAGACTCCGTAACTACTCAGGTAGATGG
AGTTGTCTATTACAGAATCTATAGTGCTGTCTCAGCAGTGGCTAATGTCAACGATGTCCATCAAGCAACA
TTTCTGCTGGCTCAAACCACTCTGAGAAATGTCTTAGGGACACAGACCTTGTCCCAGATCTTAGCTGGAC
GAGAAGAGATCGCCCATAGCATCCAGACTTTACTTGATGATGCCACCGAACTGTGGGGGATCCGGGTGGC
CCGAGTGGAAATCAAAGATGTTCGGATTCCCGTGCAGTTGCAGAGATCCATGGCAGCCGAGGCTGAGGCC
ACCCGGGAAGCGAGAGCCAAGGTCCTTGCAGCTGAAGGAGAAATGAATGCTTCCAAATCCCTGAAGTCAG
CCTCCATGGTGCTGGCTGAGTCTCCCATAGCTCTCCAGCTGCGCTACCTGCAGACCTTGAGCACGGTAGC
CACCGAGAAGAATTCTACGATTGTGTTTCCTCTGCCCATGAATATACTAGAGGGCATTGGTGGCGTCAGC
TATGATAACCACAAGAAGCTTCCAAATAAAGCCTGA

Translation (291 aa):
MDSRVSSPEKQDKENFVGVNNKRLGVCGWILFSLSFLLVIITFPISIWMCLKIIKEYERAVVFRLGRIQA
DKAKGPGLILVLPCIDVFVKVDLRTVTCNIPPQEILTRDSVTTQVDGVVYYRIYSAVSAVANVNDVHQAT
FLLAQTTLRNVLGTQTLSQILAGREEIAHSIQTLLDDATELWGIRVARVEIKDVRIPVQLQRSMAAEAEA
TREARAKVLAAEGEMNASKSLKSASMVLAESPIALQLRYLQTLSTVATEKNSTIVFPLPMNILEGIGGVS
YDNHKKLPNKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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