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Report for CCDS6158.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6158.1 Public Homo sapiens 8 MRPL15 24 110 108 CCDS HistoryNCBI Gene:29088Re-query CCDS DB by CCDS ID:6158.1Re-query CCDS DB by GeneID:29088See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6158.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000260102.9 ENSP00000260102.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000260102.9Link to Ensembl Protein Viewer:ENSP00000260102.4Re-query CCDS DB by Nucleotide ID:ENST00000260102Re-query CCDS DB by Protein ID:ENSP00000260102
Original member Current member NCBI NM_014175.4 NP_054894.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014175.4Link to Protein Sequence:NP_054894.1Re-query CCDS DB by Nucleotide ID:NM_014175Re-query CCDS DB by Protein ID:NP_054894Link to BLAST:NP_054894.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054894.1 296 Q9P015 296 100% 0 0

Chromosomal Locations for CCDS 6158.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 54135284 54135391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54136511 54136665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54137268 54137433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54142663 54142786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 54147382 54147719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (891 nt):
ATGGCCGGTCCCTTGCAGGGCGGTGGGGCCCGGGCCCTGGACCTACTCCGGGGCCTGCCGCGTGTGAGCC
TGGCCAACTTAAAGCCGAATCCCGGCTCCAAGAAACCGGAGAGAAGACCAAGAGGTCGGAGAAGAGGTAG
AAAATGTGGCAGAGGCCATAAAGGAGAAAGGCAAAGAGGAACCCGGCCCCGCTTGGGCTTTGAGGGAGGC
CAGACTCCATTTTACATCCGAATCCCAAAATACGGGTTTAACGAAGGACATAGTTTCAGACGCCAGTATA
AGCCTTTGAGTCTCAATAGACTGCAGTATCTTATTGATTTGGGTCGTGTTGATCCTAGTCAACCTATTGA
CTTAACCCAGCTTGTCAATGGGAGAGGTGTGACCATCCAGCCACTTAAAAGGGATTATGGTGTCCAGCTG
GTTGAGGAGGGTGCTGACACCTTTACGGCAAAAGTTAATATTGAAGTACAGTTGGCTTCAGAACTAGCTA
TTGCTGCCATTGAAAAAAATGGTGGTGTTGTTACTACAGCCTTCTATGATCCAAGAAGTCTGGACATTGT
ATGCAAACCTGTTCCATTCTTTCTTCGTGGACAACCCATTCCAAAAAGAATGCTTCCACCAGAAGAACTG
GTACCATATTACACTGATGCAAAGAACCGTGGGTACCTGGCGGATCCTGCCAAATTTCCTGAAGCACGAC
TTGAACTCGCCAGGAAGTATGGTTATATCTTACCTGATATCACTAAAGATGAACTCTTCAAAATGCTCTG
TACTAGGAAGGATCCAAGGCAGATTTTCTTTGGTCTTGCTCCAGGATGGGTGGTGAATATGGCCGATAAG
AAAATCCTAAAACCTACAGATGAAAATCTCCTTAAGTATTATACCTCATGA

Translation (296 aa):
MAGPLQGGGARALDLLRGLPRVSLANLKPNPGSKKPERRPRGRRRGRKCGRGHKGERQRGTRPRLGFEGG
QTPFYIRIPKYGFNEGHSFRRQYKPLSLNRLQYLIDLGRVDPSQPIDLTQLVNGRGVTIQPLKRDYGVQL
VEEGADTFTAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLDIVCKPVPFFLRGQPIPKRMLPPEEL
VPYYTDAKNRGYLADPAKFPEARLELARKYGYILPDITKDELFKMLCTRKDPRQIFFGLAPGWVVNMADK
KILKPTDENLLKYYTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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