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Report for CCDS10322.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10322.1 Public Homo sapiens 15 BTBD1 24 110 108 CCDS HistoryNCBI Gene:53339Re-query CCDS DB by CCDS ID:10322.1Re-query CCDS DB by GeneID:53339See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10322.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261721.9 ENSP00000261721.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261721.9Link to Ensembl Protein Viewer:ENSP00000261721.4Re-query CCDS DB by Nucleotide ID:ENST00000261721Re-query CCDS DB by Protein ID:ENSP00000261721
Original member Current member NCBI NM_025238.4 NP_079514.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025238.4Link to Protein Sequence:NP_079514.1Re-query CCDS DB by Nucleotide ID:NM_025238Re-query CCDS DB by Protein ID:NP_079514Link to BLAST:NP_079514.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079514.1 482 Q9H0C5-1 482 100% 0 0

Chromosomal Locations for CCDS 10322.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 83018067 83018225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83018707 83018853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83020675 83020762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83030136 83030328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83041728 83041925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83050073 83050178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83056389 83056545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 83066751 83067151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1449 nt):
ATGGCCTCACTCGGGCCTGCCGCAGCTGGGGAGCAGGCGTCGGGGGCTGAGGCGGAGCCGGGCCCCGCGG
GGCCGCCGCCGCCGCCCTCACCGTCCTCTCTGGGGCCCCTGCTCCCCCTGCAGCGGGAACCTCTCTACAA
CTGGCAGGCGACCAAGGCGTCGCTGAAGGAGCGCTTCGCCTTCCTCTTCAACTCGGAGCTGCTGAGCGAT
GTGCGCTTCGTACTGGGCAAGGGTCGCGGCGCCGCCGCCGCTGGGGGCCCGCAGCGCATCCCCGCCCACC
GCTTCGTGCTGGCGGCCGGCAGCGCCGTCTTTGACGCCATGTTCAACGGCGGCATGGCCACCACGTCGGC
CGAGATCGAGCTGCCGGACGTGGAGCCCGCAGCCTTCCTGGCGCTGCTGAGATTTCTATATTCAGATGAA
GTTCAAATTGGTCCAGAAACAGTTATGACCACTCTTTATACTGCCAAGAAATACGCAGTCCCAGCCTTGG
AAGCACACTGTGTAGAATTTCTCACCAAACATCTTAGGGCAGATAATGCCTTTATGTTACTTACTCAGGC
TCGATTATTTGATGAACCTCAGCTTGCTAGTCTTTGTCTAGATACAATAGACAAAAGCACAATGGATGCA
ATAAGTGCAGAAGGGTTTACTGATATTGATATAGATACACTCTGTGCAGTTTTAGAGAGAGACACACTCA
GTATTCGAGAAAGTCGACTTTTTGGAGCTGTTGTACGCTGGGCAGAAGCAGAATGTCAGAGACAACAATT
ACCTGTGACTTTTGGGAATAAACAAAAAGTTCTAGGAAAAGCACTTTCCTTAATCCGGTTCCCACTGATG
ACAATTGAGGAATTTGCAGCAGGTCCTGCTCAATCTGGAATTTTGTCAGATCGTGAAGTGGTAAACCTCT
TTCTTCATTTTACTGTCAACCCTAAACCCCGAGTTGAATACATTGACCGACCAAGATGCTGTCTCAGGGG
AAAGGAATGCTGCATCAATAGATTCCAGCAAGTAGAAAGCCGCTGGGGTTACAGTGGGACGAGTGATCGA
ATCAGATTCACAGTTAATAGAAGGATCTCTATAGTTGGATTTGGCTTGTATGGATCTATTCATGGCCCTA
CAGATTATCAAGTGAATATACAGATCATTGAATATGAGAAAAAGCAAACCCTGGGACAGAATGATACCGG
CTTTAGTTGTGATGGGACAGCTAACACATTCAGGGTCATGTTCAAGGAACCCATAGAGATCCTGCCCAAT
GTGTGCTACACAGCATGTGCAACACTCAAAGGTCCAGATTCCCACTATGGCACAAAAGGATTGAAGAAAG
TAGTGCATGAGACACCTGCTGCAAGCAAGACTGTTTTTTTCTTTTTTAGTTCCCCTGGCAATAATAATGG
CACTTCAATAGAAGATGGACAAATTCCAGAAATCATATTTTATACATAA

Translation (482 aa):
MASLGPAAAGEQASGAEAEPGPAGPPPPPSPSSLGPLLPLQREPLYNWQATKASLKERFAFLFNSELLSD
VRFVLGKGRGAAAAGGPQRIPAHRFVLAAGSAVFDAMFNGGMATTSAEIELPDVEPAAFLALLRFLYSDE
VQIGPETVMTTLYTAKKYAVPALEAHCVEFLTKHLRADNAFMLLTQARLFDEPQLASLCLDTIDKSTMDA
ISAEGFTDIDIDTLCAVLERDTLSIRESRLFGAVVRWAEAECQRQQLPVTFGNKQKVLGKALSLIRFPLM
TIEEFAAGPAQSGILSDREVVNLFLHFTVNPKPRVEYIDRPRCCLRGKECCINRFQQVESRWGYSGTSDR
IRFTVNRRISIVGFGLYGSIHGPTDYQVNIQIIEYEKKQTLGQNDTGFSCDGTANTFRVMFKEPIEILPN
VCYTACATLKGPDSHYGTKGLKKVVHETPAASKTVFFFFSSPGNNNGTSIEDGQIPEIIFYT


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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