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Report for CCDS5871.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5871.1 Public Homo sapiens 7 PRSS58 24 110 108 CCDS HistoryNCBI Gene:136541Re-query CCDS DB by CCDS ID:5871.1Re-query CCDS DB by GeneID:136541See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5871.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000552471.1 ENSP00000446916.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000552471.1Link to Ensembl Protein Viewer:ENSP00000446916.1Re-query CCDS DB by Nucleotide ID:ENST00000552471Re-query CCDS DB by Protein ID:ENSP00000446916
Original member Current member EBI ENST00000547058.6 ENSP00000447588.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000547058.6Link to Ensembl Protein Viewer:ENSP00000447588.2Re-query CCDS DB by Nucleotide ID:ENST00000547058Re-query CCDS DB by Protein ID:ENSP00000447588
Original member Current member NCBI NM_001001317.5 NP_001001317.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001317.5Link to Protein Sequence:NP_001001317.1Re-query CCDS DB by Nucleotide ID:NM_001001317Re-query CCDS DB by Protein ID:NP_001001317Link to BLAST:NP_001001317.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001317.1 241 Q8IYP2 241 100% 0 0

Chromosomal Locations for CCDS 5871.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 142252221 142252370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142252472 142252611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142255055 142255311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142255535 142255673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142257668 142257707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGAAGTTTATCCTCCTCTGGGCTCTCTTGAATCTGACTGTTGCTTTGGCCTTTAATCCAGATTACACAG
TCAGCTCCACTCCCCCTTACTTGGTCTATTTGAAATCTGACTACTTGCCCTGCGCTGGAGTCCTGATCCA
CCCGCTTTGGGTGATCACAGCTGCACACTGCAATTTACCAAAGCTTCGGGTGATATTGGGGGTTACAATC
CCAGCAGACTCTAATGAAAAGCATCTGCAAGTGATTGGCTATGAGAAGATGATTCATCATCCACACTTCT
CAGTCACTTCTATTGATCATGACATCATGCTAATCAAGCTGAAAACAGAGGCTGAACTCAATGACTATGT
GAAATTAGCCAACCTGCCCTACCAAACTATCTCTGAAAATACCATGTGCTCTGTCTCTACCTGGAGCTAC
AATGTGTGTGATATCTACAAAGAGCCCGATTCACTGCAAACTGTGAACATCTCTGTAATCTCCAAGCCTC
AGTGTCGCGATGCCTATAAAACCTACAACATCACGGAAAATATGCTGTGTGTGGGCATTGTGCCAGGAAG
GAGGCAGCCCTGCAAGGAAGTTTCTGCTGCCCCGGCAATCTGCAATGGGATGCTTCAAGGAATCCTGTCT
TTTGCGGATGGATGTGTTTTGAGAGCTGATGTTGGCATCTATGCCAAAATTTTTTACTATATACCCTGGA
TTGAAAATGTAATCCAAAATAACTGA

Translation (241 aa):
MKFILLWALLNLTVALAFNPDYTVSSTPPYLVYLKSDYLPCAGVLIHPLWVITAAHCNLPKLRVILGVTI
PADSNEKHLQVIGYEKMIHHPHFSVTSIDHDIMLIKLKTEAELNDYVKLANLPYQTISENTMCSVSTWSY
NVCDIYKEPDSLQTVNISVISKPQCRDAYKTYNITENMLCVGIVPGRRQPCKEVSAAPAICNGMLQGILS
FADGCVLRADVGIYAKIFYYIPWIENVIQNN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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