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Report for CCDS12273.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12273.1 Public Homo sapiens 19 ZNF791 24 110 108 CCDS HistoryNCBI Gene:163049Re-query CCDS DB by CCDS ID:12273.1Re-query CCDS DB by GeneID:163049See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12273.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343325.9 ENSP00000342974.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343325.9Link to Ensembl Protein Viewer:ENSP00000342974.4Re-query CCDS DB by Nucleotide ID:ENST00000343325Re-query CCDS DB by Protein ID:ENSP00000342974
Original member Current member NCBI NM_153358.3 NP_699189.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153358.3Link to Protein Sequence:NP_699189.2Re-query CCDS DB by Nucleotide ID:NM_153358Re-query CCDS DB by Protein ID:NP_699189Link to BLAST:NP_699189.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_699189.2 576 Q3KP31-1 576 100% 0 0

Chromosomal Locations for CCDS 12273.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 12611080 12611082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12623700 12623826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12624650 12624710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 12627721 12629260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1731 nt):
ATGGACTCAGTGGCTTTTGAGGATGTGTCTGTGAGCTTCAGCCAGGAGGAGTGGGCTCTGCTGGCTCCTT
CACAGAAGAAACTCTACAGAGATGTGATGCAGGAAACATTCAAGAACCTGGCATCTATAGGGGAAAAATG
GGAAGACCCGAATGTTGAAGATCAACACAAAAACCAAGGACGAAATCTAAGAAGCCATACGGGAGAGAGA
CTCTGTGAAGGTAAAGAAGGTAGTCAATGTGCAGAAAACTTCAGTCCCAATCTCAGTGTGACGAAGAAGA
CTGCCGGAGTAAAACCATATGAGTGTACTATCTGTGGAAAAGCCTTCATGCGTCTCTCATCCCTTACTAG
ACACATGAGGTCTCACACTGGATACGAGCTATTTGAGAAGCCATATAAATGTAAGGAGTGTGAGAAAGCC
TTTAGTTATCTCAAATCCTTTCAAAGACATGAAAGGAGTCACACTGGAGAAAAACCCTATAAATGTAAAC
AATGTGGAAAAACCTTCATATATCACCAGCCCTTTCAAAGACATGAGCGGACTCACATTGGAGAAAAACC
CTATGAATGTAAGCAATGTGGAAAAGCTCTTAGTTGTTCCAGTTCGCTTCGAGTTCATGAAAGGATTCAC
ACTGGAGAAAAGCCCTATGAATGTAAACAATGTGGGAAAGCCTTCAGTTGTTCCAGTTCTATTCGAGTAC
ACGAAAGAACTCACACTGGAGAGAAACCCTATGCATGTAAGGAATGTGGGAAAGCCTTCATTTCCCACAC
AAGTGTTCTAACACACATGATAACACACAACGGAGATAGACCTTATAAATGCAAAGAATGTGGAAAGGCA
TTCATTTTTCCCAGTTTTTTACGAGTACATGAAAGAATTCACACTGGAGAGAAACCCTATAAATGTAAAC
AATGTGGTAAAGCCTTCAGATGTTCCACCTCCATTCAAATTCATGAAAGAATTCATACTGGAGAGAAGCC
CTATAAATGTAAAGAATGTGGGAAATCTTTCAGTGCACGCCCAGCCTTTCGAGTACACGTGAGAGTGCAT
ACTGGAGAGAAACCCTATAAGTGTAAAGAATGTGGGAAAGCCTTTAGTAGAATCAGTTACTTTCGAATAC
ATGAAAGGACTCACACTGGAGAGAAACCCTACGAATGTAAAAAATGTGGGAAAACTTTCAATTATCCTCT
AGATTTGAAAATCCACAAGAGAAATCACACTGGAGAAAAACCCTATGAGTGTAAGGAATGTGCAAAAACC
TTCATTTCTCTTGAGAACTTTCGAAGACACATGATCACCCACACTGGAGACGGACCTTATAAATGTAGGG
ACTGTGGGAAGGTGTTCATTTTTCCTAGTGCGTTACGAACACATGAAAGAACTCACACTGGAGAGAAACC
CTATGAATGTAAACAATGTGGAAAAGCCTTTAGTTGTTCTAGTTACATTCGGATACATAAAAGAACTCAC
ACTGGGGAGAAACCTTATGAATGTAAGGAATGCGGGAAGGCCTTTATTTATCCCACAAGCTTTCAAGGAC
ACATGAGAATGCATACTGGAGAGAAACCCTATAAATGTAAAGAATGTGGGAAGGCCTTTAGTCTTCACAG
TTCCTTTCAAAGACATACAAGAATTCACAATTATGAGAAACCTCTTGAATGTAAGCAATGTGGAAAAGCC
TTCAGTGTGTCCACATCCTTAAAAAAACATATGAGAATGCACAATCGATAG

Translation (576 aa):
MDSVAFEDVSVSFSQEEWALLAPSQKKLYRDVMQETFKNLASIGEKWEDPNVEDQHKNQGRNLRSHTGER
LCEGKEGSQCAENFSPNLSVTKKTAGVKPYECTICGKAFMRLSSLTRHMRSHTGYELFEKPYKCKECEKA
FSYLKSFQRHERSHTGEKPYKCKQCGKTFIYHQPFQRHERTHIGEKPYECKQCGKALSCSSSLRVHERIH
TGEKPYECKQCGKAFSCSSSIRVHERTHTGEKPYACKECGKAFISHTSVLTHMITHNGDRPYKCKECGKA
FIFPSFLRVHERIHTGEKPYKCKQCGKAFRCSTSIQIHERIHTGEKPYKCKECGKSFSARPAFRVHVRVH
TGEKPYKCKECGKAFSRISYFRIHERTHTGEKPYECKKCGKTFNYPLDLKIHKRNHTGEKPYECKECAKT
FISLENFRRHMITHTGDGPYKCRDCGKVFIFPSALRTHERTHTGEKPYECKQCGKAFSCSSYIRIHKRTH
TGEKPYECKECGKAFIYPTSFQGHMRMHTGEKPYKCKECGKAFSLHSSFQRHTRIHNYEKPLECKQCGKA
FSVSTSLKKHMRMHNR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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