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Report for CCDS45752.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45752.1 Public Homo sapiens 17 METTL2A 24 110 108 CCDS HistoryNCBI Gene:339175Re-query CCDS DB by CCDS ID:45752.1Re-query CCDS DB by GeneID:339175See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45752.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311506.10 ENSP00000309610.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311506.10Link to Ensembl Protein Viewer:ENSP00000309610.6Re-query CCDS DB by Nucleotide ID:ENST00000311506Re-query CCDS DB by Protein ID:ENSP00000309610
Original member Current member NCBI NM_181725.4 NP_859076.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181725.4Link to Protein Sequence:NP_859076.3Re-query CCDS DB by Nucleotide ID:NM_181725Re-query CCDS DB by Protein ID:NP_859076Link to BLAST:NP_859076.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_859076.3 378 Q96IZ6-1 378 100% 0 0

Chromosomal Locations for CCDS 45752.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 62423903 62424012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62424219 62424310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62426299 62426654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62427788 62427837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62435232 62435292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62440617 62440756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62444837 62444943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62447701 62447766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 62448575 62448729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1137 nt):
ATGGCCGGCTCCTACCCTGAAGGTGCACCTGCAGTCCTCGCCGATAAGAGGCAGCAGTTCGGAAGCCGGT
TCCTGAGAGATCCGGCGCGCGTCTTCCACCACAATGCCTGGGACAATGTGGAGTGGTCGGAAGAGCAAGC
CGCGGCGGCGGAGAGAAAAGTCCAGGAGAACAGTATCCAGCGGGTGTGCCAGGAGAAACAAGTTGATTAT
GAGATCAATGCCCACAAATACTGGAATGACTTCTACAAAATCCACGAAAATGGGTTTTTCAAGGATAGAC
ATTGGCTTTTTACCGAATTCCCTGAGCTGGCACCTAGCCAAAATCAAAATCATTTGAAGGACTGGTTCTT
GGAGAACAAGAGTGAAGTACCTGAATGTAGAAACAATGAGGATGGACCTGGTTTAATAATGGAAGAACAG
CACAAGTGTTCTTCAAAGAGCCTTGAACATAAAACACAGACACTTCCTGTGGAGGAGAATGTAACTCAGA
AAATTAGTGACCTGGAAATTTGTGCTGATGAGTTTCCTGGATCCTCAGCCACCTACCGAATACTGGAGGT
TGGCTGTGGTGTGGGAAACACAGTCTTTCCAATTTTACAAACGAACAATGACCCAGGACTCTTTGTTTAT
TGCTGTGATTTTTCTTCCACAGCTATAGAACTGGTCCAGACAAATTCAGAATATGATCCTTCTCGGTGTT
TTGCCTTTGTTCACGACCTGTGTGATGAAGAGAAGAGTTACCCAGTGCCCAAGGGCAGTCTTGATATTAT
CATTCTCATATTTGTTCTTTCAGCAATTGTTCCAGACAAGATGCAGAAGGCTATCAACAGGCTGAGCAGG
CTTCTGAAACCTGGCGGGATGATGCTTCTGCGAGATTACGGCCGCTATGACATGGCTCAGCTTCGGTTTA
AAAAAGGTCAGTGTCTATCTGGAAATTTCTACGTGAGAGGTGATGGAACCAGAGTTTACTTCTTCACACA
AGAGGAACTGGACACGCTTTTCACCACTGCTGGACTGGAAAAAGTTCAGAACCTGGTGGATCGCCGACTG
CAGGTGAACCGAGGAAAGCAACTGACAATGTACCGGGTTTGGATTCAGTGCAAATACTGCAAGCCCCTTC
TGTCCAGCACCAGCTGA

Translation (378 aa):
MAGSYPEGAPAVLADKRQQFGSRFLRDPARVFHHNAWDNVEWSEEQAAAAERKVQENSIQRVCQEKQVDY
EINAHKYWNDFYKIHENGFFKDRHWLFTEFPELAPSQNQNHLKDWFLENKSEVPECRNNEDGPGLIMEEQ
HKCSSKSLEHKTQTLPVEENVTQKISDLEICADEFPGSSATYRILEVGCGVGNTVFPILQTNNDPGLFVY
CCDFSSTAIELVQTNSEYDPSRCFAFVHDLCDEEKSYPVPKGSLDIIILIFVLSAIVPDKMQKAINRLSR
LLKPGGMMLLRDYGRYDMAQLRFKKGQCLSGNFYVRGDGTRVYFFTQEELDTLFTTAGLEKVQNLVDRRL
QVNRGKQLTMYRVWIQCKYCKPLLSSTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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