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Report for CCDS37067.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37067.1 Public Mus musculus 15 Rims2 23 108 98 CCDS HistoryNCBI Gene:116838Re-query CCDS DB by CCDS ID:37067.1Re-query CCDS DB by GeneID:116838See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37067.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000082054.11 ENSMUSP00000080711.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000082054.11Link to Ensembl Protein Viewer:ENSMUSP00000080711.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000082054Re-query CCDS DB by Protein ID:ENSMUSP00000080711
Original member Current member NCBI NM_053271.2 NP_444501.1 Accepted alive Link to Nucleotide Sequence:NM_053271.2Link to Protein Sequence:NP_444501.1Re-query CCDS DB by Nucleotide ID:NM_053271Re-query CCDS DB by Protein ID:NP_444501Link to BLAST:NP_444501.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_444501.1 1530 Q9EQZ7-1 1530 100% 0 0

Chromosomal Locations for CCDS 37067.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 39198363 39198538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39274976 39275008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39275414 39275500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39292102 39292312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39345310 39345620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39436997 39437922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39452224 39452432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39454360 39454479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39456678 39456777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39457764 39457887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39459589 39459635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39462498 39462610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39472334 39472464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39476380 39476551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39478557 39478710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39506966 39507034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39509645 39509801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39511264 39511374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39535872 39535981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39566943 39567043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39585590 39585762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39616269 39616510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39674940 39675081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39679248 39679360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39679630 39679731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39680989 39681128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39681546 39681764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4593 nt):
ATGTCGGCTCCGCTCGGGCCCCGGGGCCGCCCGGCTCCCACCCCGGCGGCCTCTCAACCTCCTCCGCAGC
CCGAGATGCCGGACCTCAGCCACCTCACGGAAGAGGAGAGGAAAATCATCCTGGCTGTCATGGATCGTCA
GAAGAAAGAAGAGGAGAAGGAGCAGTCCGTGCTCAAGATCAAAGAAGAACACAAAGCACAACCGACACAG
TGGTTTCCCTTTAGTGGGATCACTGAACTGGTAAATAACGTTCTGCAGCCCCAGCAAAAACAACCCAATG
AGAAGGAGCCCCAGACAAAGCTGCACCAACAATTTGAAATGTATAAGGAGCAAGTCAAGAAGATGGGAGA
GGAATCGCAGCAGCAGCAAGAGCAGAAGGGTGATGCCCCGACCTGTGGCATCTGCCACAAGACAAAATTT
GCAGATGGATGCGGCCATAATTGTTCCTATTGCCAAACCAAGTTCTGTGCTCGATGTGGAGGTCGAGTGT
CTTTACGCTCAAACAAGGTTATGTGGGTGTGTAATTTGTGCCGAAAACAACAAGAAATCCTCACTAAATC
AGGAGCATGGTTTTATAATAGTGGGTCTAACACACTGCAGCAACCTGATCAAAAGGTTCCTCGAGGGCTT
CGAAATGAGGAAGCCCCTCAGGAGAAGAAAGCAAAACTACACGAGCAGCCCCAGTTCCAAGGAGCCCCAG
GTGACTTATCAGTACCTGCAGTTGAGAAAGGCCGAGCTCATGGGCTCACAAGACAGGATACTATTAAAAA
TGGATCAGGAGTGAAGCACCAGATTGCCAGTGACATGCCTTCAGACAGAAAACGAAGTCCATCAGTGTCC
AGGGATCAAAATCGAAGATACGAGCAAAGTGAAGAAAGAGAGGACTACTCACAGTATGTTCCTTCAGATG
GTACAATGCCAAGATCTCCTTCGGATTATGCTGATAGACGATCTCAGCGTGAGCCTCAATTTTATGAAGA
ACCTGGTCATTTAAATTACAGGGATTCTAACAGGAGAGGCCATAGACATTCCAAAGAGTATATTGTGGAT
GATGAAGATGTGGAGAGCAGAGATGAATATGAAAGACAAAGGAGAGAGGAGGAATACCAGGCACGCTACA
GAAGTGATCCAAATCTGGCCCGGTATCCCGTAAAGCCACAACCCTACGAAGAACAAATGCGCATCCACGC
TGAGGTGTCCAGGGCACGACATGAGAGAAGGCACAGTGATGTTTCTTTGGCAAACGCTGAACTAGAAGAT
TCCAGGATTTCTCTGCTAAGGATGGATAGACCATCAAGGCAAAGATCTGTATCTGAACGTAGAGCTGCAA
TGGAAAACCAACGATCGTATTCAATGGAAAGAACTCGAGAGGCTCAGGGACAAAGTTCTTATCCACAAAG
GACCTCAAATCATAGTCCTCCCACCCCTCGGCGGAGCCCTATACCGCTTGATAGACCAGACATGAGGCGC
GCTGACTCCCTACGGAAACAGCACCACTTAGATCCCAGCTCTGCTGTGAGGAAAACGAAGCGAGAAAAAA
TGGAAACCATGTTAAGGAATGATTCTTTGAGTTCAGACCAGTCCGAGTCAGTGAGGCCGCCCCCACCAAG
GCCTCATAAATCCAAGAAAGGAGGTAAAATGCGCCAGGTTTCACTGAGCAGCTCGGAGGAGGAGCTGGCA
TCCACACCTGAGTATACAAGCTGTGATGATGTGGAGCTGGAAAGCGAGAGTGTGAGTGAGAAAGGGGACA
GTCAAAAGGGAAAAAGAAAAACTAGTGAGCAGGGAGTTTTGTCGGATTCTAACACCAGGTCTGAGAGACA
AAAGAAAAGGATGTACTATGGTGGCCACTCTTTGGAAGAGGATTTGGAATGGTCTGAGCCTCAGATTAAG
GACTCTGGGGTAGATACCTGTAGTAGCACAACCCTTAACGAGGAGCATAGCCATAGTGATAAGCACCCTG
TGACCTGGCAGCCATCCAAAGATGGAGATCGCCTAATTGGTCGTATTTTATTAAATAAGCGTTTAAAAGA
TGGGAGTGTACCTCGAGACTCAGGAGCAATGCTGGGCTTAAAGGTTGTAGGAGGAAAGATGACTGAATCA
GGTCGACTTTGTGCATTTATTACCAAAGTAAAAAAAGGAAGTTTAGCTGATACTGTAGGACATCTTAGAC
CAGGTGATGAAGTCTTGGAATGGAATGGGAGGCTATTGCAAGGAGCCACATTTGAGGAAGTTTACAACAT
TATTCTAGAATCCAAACCTGAACCACAAGTTGAGCTTGTTGTTTCAAGGCCAATTGGAGATATTCCTAGA
ATACCTGATAGCACGCATGCACAACTGGAATCCAGTTCTAGCTCATTTGAATCTCAAAAAATGGACCGTC
CTTCTATATCCGTTACCTCACCCATGAGTCCTGGCATGCTGAGGGATGTCCCGCAGTTCTTATCTGGACA
GCTTTCAATAAAACTATGGTTTGACAAGGTTGGTCACCAGTTGATAGTTACAATTTTGGGAGCAAAGGAT
CTCCCTTCCAGGGAAGATGGGAGGCCAAGGAATCCTTATGTTAAGATTTACTTCCTTCCAGATAGAAGTG
ATAAAAATAAGAGAAGAACAAAAACAGTCAAGAAAACTTTGGAACCCAAATGGAACCAGACTTTCATTTA
TTCTCCTGTCCACCGAAGAGAATTCCGTGAACGAATGCTGGAAATTACCCTTTGGGATCAAGCTAGAGTT
CGAGAAGAAGAGAGCGAATTCTTAGGAGAGATTTTAATTGAATTGGAAACAGCTTTGCTAGATGATGAGC
CGCACTGGTATAAGCTGCAGACCCATGATGTCTCCTCATTGCCACTCCCTCGCCCTTCCCCATATCTGCC
CCGGAGGCAGCTCCATGGAGAGAGCCCAACGCGCAGGCTGCAAAGGTCGAAGAGAATAAGTGACAGTGAA
GTGTCTGACTACGACTGCGAGGATGGCGTGGGAGTAGTGTCAGATTATCGACACAATGGCCGCGATCTTC
AAAGCTCCACGTTGTCGGTGCCAGAACAAGTCATGTCATCAAATCATTGCTCACCATCAGGGTCTCCTCA
TCGAGTAGATGTTATAGGAAGGACAAGGTCATGGTCGCCTAGTGCCCCTCCTCCTCAAAGGAATGTGGAA
CAGGGGCACCGAGGGACACGTGCTACTGGCCATTACAACACAATTAGCCGAATGGATAGACACCGTGTCA
TGGATGACCACTACTCTTCAGATAGAGACAGGTCTCACCCTCGTACCGGGTCTGTCCAGACAAGCCCATC
AAGTACTCCGGGAACAGGACGAAGGGGCCGACAGCTTCCACAGCTTCCACCAAAGGGAACATTGGAGAGA
AGTGCTATGGATATAGAGGAGAGAAATCGCCAAATGAAACTTAACAAATACAAACAGGTAGCCGGATCAG
ACCCCAGACTGGAGCAAGATTACCATTCGAAGTATCGCTCAGGATGGGATCCACATAGAGGGGCAGATAC
TGTTTCCACTAAATCCTCGGACAGTGATGTAAGTGATGTATCTGCGGTTTCAAGGACTAGTAGTGCTTCT
CGTTTCAGCAGCACAAGCTACATGTCCGTCCAATCAGAGCGGCCGAGAGGAAACAGGAAAATCAGTGTCT
TTACATCCAAAATGCAAAACAGACAGATGGGCGTGTCGGGGAAGAACTTGACCAAAAGCACCAGCATCAG
TGGAGACATGTGCTCACTGGAGAAGAATGACGGCAGCCAGTCCGACACTGCAGTGGGCGCCCTGGGTACC
AGTGGCAAGAAGCGGCGATCTAGCATTGGGGCCAAAATGGTAGCTATTGTTGGTCTCTCACGGAAAAGTC
GCAGTGCCTCTCAACTCAGCCAAACCGAAGGAGGAGGTAAAAAGCTACGGAGCACTGTTCAGAGAAGCAC
GGAGACCGGGCTAGCAGTGGAGATGAGGAACTGGATGACCCGCCAGGCCAGCCGGGAATCCACAGATGGC
AGCATGAACAGCTATAGCTCGGAAGGAAATCTGATCTTCCCTGGGGTCCGCCTGGCCTCTGACAGCCAGT
TCAGTGATTTCCTGGATGGCCTGGGCCCTGCTCAGCTAGTGGGACGCCAGACCCTGGCTACTCCTGCAAT
GGGTGACATTCAGGTGGGAATGATGGATAAAAAGGGACAGCTGGAGGTAGAAATCATCCGGGCGCGCGGC
CTTGTGGTAAAACCAGGTTCCAAGACACTGCCAGCACCGTATGTCAAGGTGTATCTGTTAGACAACGGAG
TCTGCATAGCCAAAAAGAAAACCAAGGTGGCGAGAAAGACCCTGGAGCCCCTGTACCAGCAGCTCTTGTC
CTTCGAGGAGAGCCCCCAGGGGAGGGTGTTACAGATCATTGTCTGGGGAGATTATGGTCGTATGGATCAC
AAATCCTTTATGGGAGTGGCCCAGATACTCTTAGATGAACTGGAACTATCCAACATGGTGATTGGATGGT
TCAAACTCTTCCCTCCTTCCTCCCTAGTAGATCCAACCTTGGCACCTCTGACAAGAAGAGCTTCCCAATC
GTCTCTGGAAAGTTCTACCGGACCTTCTTACTCTCGTTCATAG

Translation (1530 aa):
MSAPLGPRGRPAPTPAASQPPPQPEMPDLSHLTEEERKIILAVMDRQKKEEEKEQSVLKIKEEHKAQPTQ
WFPFSGITELVNNVLQPQQKQPNEKEPQTKLHQQFEMYKEQVKKMGEESQQQQEQKGDAPTCGICHKTKF
ADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQQEILTKSGAWFYNSGSNTLQQPDQKVPRGL
RNEEAPQEKKAKLHEQPQFQGAPGDLSVPAVEKGRAHGLTRQDTIKNGSGVKHQIASDMPSDRKRSPSVS
RDQNRRYEQSEEREDYSQYVPSDGTMPRSPSDYADRRSQREPQFYEEPGHLNYRDSNRRGHRHSKEYIVD
DEDVESRDEYERQRREEEYQARYRSDPNLARYPVKPQPYEEQMRIHAEVSRARHERRHSDVSLANAELED
SRISLLRMDRPSRQRSVSERRAAMENQRSYSMERTREAQGQSSYPQRTSNHSPPTPRRSPIPLDRPDMRR
ADSLRKQHHLDPSSAVRKTKREKMETMLRNDSLSSDQSESVRPPPPRPHKSKKGGKMRQVSLSSSEEELA
STPEYTSCDDVELESESVSEKGDSQKGKRKTSEQGVLSDSNTRSERQKKRMYYGGHSLEEDLEWSEPQIK
DSGVDTCSSTTLNEEHSHSDKHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTES
GRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRPIGDIPR
IPDSTHAQLESSSSSFESQKMDRPSISVTSPMSPGMLRDVPQFLSGQLSIKLWFDKVGHQLIVTILGAKD
LPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARV
REEESEFLGEILIELETALLDDEPHWYKLQTHDVSSLPLPRPSPYLPRRQLHGESPTRRLQRSKRISDSE
VSDYDCEDGVGVVSDYRHNGRDLQSSTLSVPEQVMSSNHCSPSGSPHRVDVIGRTRSWSPSAPPPQRNVE
QGHRGTRATGHYNTISRMDRHRVMDDHYSSDRDRSHPRTGSVQTSPSSTPGTGRRGRQLPQLPPKGTLER
SAMDIEERNRQMKLNKYKQVAGSDPRLEQDYHSKYRSGWDPHRGADTVSTKSSDSDVSDVSAVSRTSSAS
RFSSTSYMSVQSERPRGNRKISVFTSKMQNRQMGVSGKNLTKSTSISGDMCSLEKNDGSQSDTAVGALGT
SGKKRRSSIGAKMVAIVGLSRKSRSASQLSQTEGGGKKLRSTVQRSTETGLAVEMRNWMTRQASRESTDG
SMNSYSSEGNLIFPGVRLASDSQFSDFLDGLGPAQLVGRQTLATPAMGDIQVGMMDKKGQLEVEIIRARG
LVVKPGSKTLPAPYVKVYLLDNGVCIAKKKTKVARKTLEPLYQQLLSFEESPQGRVLQIIVWGDYGRMDH
KSFMGVAQILLDELELSNMVIGWFKLFPPSSLVDPTLAPLTRRASQSSLESSTGPSYSRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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