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Report for CCDS2076.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2076.1 Public Homo sapiens 2 SULT1C2 24 110 108 CCDS HistoryNCBI Gene:6819Re-query CCDS DB by CCDS ID:2076.1Re-query CCDS DB by GeneID:6819See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2076.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326853.9 ENSP00000319622.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000326853.9Link to Ensembl Protein Viewer:ENSP00000319622.5Re-query CCDS DB by Nucleotide ID:ENST00000326853Re-query CCDS DB by Protein ID:ENSP00000319622
Original member Current member NCBI NM_176825.3 NP_789795.1 Accepted alive Link to Nucleotide Sequence:NM_176825.3Link to Protein Sequence:NP_789795.1Re-query CCDS DB by Nucleotide ID:NM_176825Re-query CCDS DB by Protein ID:NP_789795Link to BLAST:NP_789795.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_789795.1 307 O00338-2 307 100% 0 0

Chromosomal Locations for CCDS 2076.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 108293668 108293818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108294229 108294354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108298567 108298661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108300900 108300935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108304574 108304700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108305172 108305266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108305415 108305595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108308352 108308464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGGCCCTGACCTCAGACCTGGGGAAACAGATAAAACTGAAAGAGGTGGAGGGGACCCTCCTGCAGCCTG
CAACTGTGGACAACTGGAGCCAGATCCAGAGCTTCGAGGCCAAACCAGATGATCTCCTCATCTGCACCTA
CCCTAAAGCAGGGACAACGTGGATTCAGGAAATTGTGGATATGATTGAACAGAATGGGGACGTGGAGAAG
TGCCAGCGAGCCATCATCCAACACCGCCATCCTTTCATTGAGTGGGCTCGGCCACCCCAACCTTCTGAGA
CAGGATTTCACCATGTTGCCCAGGCTGGTCTCAAACTCCTGAGCTCAAGCAATCCACCTGCCTCAACCTC
CCAAAGTGCCAAGATTACAGACCTGCTGCCACCGTCTTTCTGGGAAAACAACTGCAAGTTCCTTTATGTA
GCTCGAAATGCCAAAGACTGTATGGTTTCCTACTACCATTTCCAAAGGATGAACCACATGCTTCCTGACC
CTGGTACCTGGGAAGAGTATTTTGAAACCTTCATCAATGGAAAAGTGGTTTGGGGTTCCTGGTTTGACCA
CGTGAAAGGATGGTGGGAGATGAAAGACAGACACCAGATTCTCTTCCTCTTCTATGAGGACATAAAGAGG
GACCCAAAGCATGAAATTCGGAAGGTGATGCAGTTCATGGGAAAGAAGGTGGATGAAACAGTGCTAGATA
AAATTGTCCAGGAGACGTCATTTGAGAAAATGAAAGAAAATCCCATGACAAATCGTTCTACAGTTTCCAA
ATCTATCTTGGACCAGTCAATTTCCTCCTTCATGAGAAAAGGAACTGTGGGGGATTGGAAAAACCACTTC
ACTGTTGCCCAGAATGAGAGGTTTGATGAAATCTATAGAAGAAAGATGGAAGGAACCTCCATAAACTTCT
GCATGGAACTCTGA

Translation (307 aa):
MALTSDLGKQIKLKEVEGTLLQPATVDNWSQIQSFEAKPDDLLICTYPKAGTTWIQEIVDMIEQNGDVEK
CQRAIIQHRHPFIEWARPPQPSETGFHHVAQAGLKLLSSSNPPASTSQSAKITDLLPPSFWENNCKFLYV
ARNAKDCMVSYYHFQRMNHMLPDPGTWEEYFETFINGKVVWGSWFDHVKGWWEMKDRHQILFLFYEDIKR
DPKHEIRKVMQFMGKKVDETVLDKIVQETSFEKMKENPMTNRSTVSKSILDQSISSFMRKGTVGDWKNHF
TVAQNERFDEIYRRKMEGTSINFCMEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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