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Report for CCDS60384.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60384.1 Public Homo sapiens 1 ZNF281 24 110 108 CCDS HistoryNCBI Gene:23528Re-query CCDS DB by CCDS ID:60384.1Re-query CCDS DB by GeneID:23528See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60384.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367352.3 ENSP00000356321.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367352.3Link to Ensembl Protein Viewer:ENSP00000356321.3Re-query CCDS DB by Nucleotide ID:ENST00000367352Re-query CCDS DB by Protein ID:ENSP00000356321
Original member Current member NCBI NM_001281294.2 NP_001268223.1 Accepted alive Link to Nucleotide Sequence:NM_001281294.2Link to Protein Sequence:NP_001268223.1Re-query CCDS DB by Nucleotide ID:NM_001281294Re-query CCDS DB by Protein ID:NP_001268223Link to BLAST:NP_001268223.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268223.1 859 Q9Y2X9-2 859 100% 0 0

Chromosomal Locations for CCDS 60384.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 200407018 200409452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 200409561 200409705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2580 nt):
ATGAAAATCGGCAGTGGGTTCCTGAGTGGCGGCGGAGGTACCGGCAGTAGCGGTGGTAGCGGCTCCGGCG
GCGGTGGTAGTGGCGGCGGCGGCGGCGGCGGCAGCAGCGGCAGGAGGGCAGAGATGGAACCCACCTTTCC
CCAGGCCCCGGCCGCTGAGCCCCCCCCTCCGCCAGCCCCGGACATGACTTTCAAGAAGGAGCCGGCGGCG
TCAGCCGCGGCCTTCCCCTCGCAGAGGACCTCCTGGGGGTTCTTGCAGTCTTTGGTTAGCATCAAACAGG
AGAAACCCGCGGATCCTGAGGAGCAGCAGTCCCACCACCACCATCACCACCACCACTATGGGGGGCTGTT
CGCTGGAGCTGAAGAGAGGTCTCCAGGCCTAGGAGGCGGTGAAGGGGGGAGTCACGGCGTCATCCAGGAC
CTCAGTATTCTCCACCAGCATGTCCAGCAGCAACCAGCCCAGCACCACCGTGACGTATTACTCAGCAGCA
GTAGCAGGACTGATGACCACCATGGCACTGAGGAGCCAAAGCAGGACACTAATGTCAAAAAGGCAAAAAG
GCCAAAGCCAGAATCTCAGGGAATCAAAGCCAAGAGGAAGCCAAGTGCATCTTCCAAACCTTCTTTGGTT
GGAGATGGAGAAGGTGCCATCCTCTCCCCAAGTCAGAAACCTCATATCTGTGATCACTGTAGTGCTGCTT
TCCGAAGCTCCTATCACCTGCGGAGACATGTCCTCATTCATACAGGAGAAAGACCTTTCCAGTGCAGCCA
GTGTAGTATGGGTTTCATTCAGAAATACCTACTACAGAGACATGAGAAAATTCATAGTAGAGAGAAGCCA
TTTGGATGTGATCAGTGCAGCATGAAGTTTATTCAGAAGTACCATATGGAGAGACACAAGAGGACACATA
GTGGAGAAAAGCCATATAAGTGTGACACTTGCCAACAGTATTTTTCAAGGACTGATAGATTGTTGAAGCA
CAGGCGCACATGTGGTGAAGTCATAGTTAAAGGAGCCACTAGTGCAGAACCTGGGTCATCAAACCATACC
AATATGGGTAATCTGGCTGTGTTGTCTCAGGGAAATACAAGTTCTTCAAGGAGAAAAACAAAGTCAAAAA
GCATAGCTATTGAAAATAAGGAACAGAAGACCGGTAAAACAAATGAATCGCAAATTTCAAATAATATAAA
CATGCAGAGTTACTCAGTAGAAATGCCTACCGTGTCTTCCAGTGGAGGCATAATTGGCACTGGAATAGAT
GAACTGCAGAAGAGGGTGCCAAAATTGATCTTTAAGAAAGGAAGCAGAAAGAATACAGATAAAAACTACC
TTAACTTTGTGTCACCATTACCAGACATAGTAGGACAGAAATCCTTGTCTGGAAAACCAAGTGGCTCACT
TGGCATAGTATCAAATAATAGTGTGGAGACCATTGGTCTTCTCCAAAGTACAAGTGGCAAACAAGGTCAG
ATAAGTAGTAATTATGATGATGCCATGCAGTTTTCAAAGAAAAGAAGATATTTACCAACTGCCAGCAGCA
ACAGTGCCTTTTCTATAAACGTAGGACACATGGTCTCCCAACAGTCTGTCATTCAGTCTGCAGGTGTCAG
TGTTTTGGACAATGAGGCACCATTGTCACTTATTGACTCCTCAGCTCTAAATGCTGAAATTAAATCTTGT
CATGACAAGTCTGGAATTCCTGATGAGGTTTTACAAAGTATTTTGGATCAATACTCCAACAAATCAGAAA
GCCAGAAAGAGGATCCTTTCAATATTGCAGAACCACGAGTGGATTTACACACCTCAGGAGAACACTCAGA
ATTGGTTCAAGAAGAAAATTTGAGCCCAGGCACCCAAACACCTTCAAATGATAAAGCAAGTATGTTGCAA
GAATACTCCAAATACCTCCAACAGGCTTTTGAAAAATCCACTAATGCAAGTTTTACTCTTGGACACGGTT
TCCAATTTGTCAGTTTGTCTTCACCTCTCCACAACCACACTTTGTTTCCAGAAAAACAAATATACACTAC
GTCTCCTTTGGAGTGTGGTTTCGGCCAATCTGTTACCTCAGTGTTGCCATCTTCATTGCCAAAGCCTCCT
TTTGGGATGTTGTTTGGATCTCAGCCAGGTCTTTATTTGTCTGCTTTGGATGCTACACATCAGCAGTTGA
CACCTTCCCAGGAGCTGGATGATCTGATAGATTCTCAGAAGAACTTAGAGACTTCATCAGCCTTCCAGTC
CTCATCTCAGAAATTGACTAGCCAGAAGGAACAGAAAAACTTAGAGTCTTCAACAGGCTTTCAGATTCCA
TCTCAGGAGTTAGCTAGCCAGATAGATCCTCAGAAAGACATAGAGCCTAGAACAACGTATCAGATTGAGA
ACTTTGCACAAGCGTTTGGTTCTCAGTTTAAGTCGGGCAGCAGGGTGCCAATGACCTTTATCACTAACTC
TAATGGAGAAGTGGACCATAGAGTAAGGACTTCAGTGTCAGATTTCTCAGGGTATACAAATATGATGTCT
GATGTAAGTGAGCCATGTAGTACAAGAGTAAAGACACCCACCAGCCAGAGTTACAGGTAA

Translation (859 aa):
MKIGSGFLSGGGGTGSSGGSGSGGGGSGGGGGGGSSGRRAEMEPTFPQAPAAEPPPPPAPDMTFKKEPAA
SAAAFPSQRTSWGFLQSLVSIKQEKPADPEEQQSHHHHHHHHYGGLFAGAEERSPGLGGGEGGSHGVIQD
LSILHQHVQQQPAQHHRDVLLSSSSRTDDHHGTEEPKQDTNVKKAKRPKPESQGIKAKRKPSASSKPSLV
GDGEGAILSPSQKPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQKYLLQRHEKIHSREKP
FGCDQCSMKFIQKYHMERHKRTHSGEKPYKCDTCQQYFSRTDRLLKHRRTCGEVIVKGATSAEPGSSNHT
NMGNLAVLSQGNTSSSRRKTKSKSIAIENKEQKTGKTNESQISNNINMQSYSVEMPTVSSSGGIIGTGID
ELQKRVPKLIFKKGSRKNTDKNYLNFVSPLPDIVGQKSLSGKPSGSLGIVSNNSVETIGLLQSTSGKQGQ
ISSNYDDAMQFSKKRRYLPTASSNSAFSINVGHMVSQQSVIQSAGVSVLDNEAPLSLIDSSALNAEIKSC
HDKSGIPDEVLQSILDQYSNKSESQKEDPFNIAEPRVDLHTSGEHSELVQEENLSPGTQTPSNDKASMLQ
EYSKYLQQAFEKSTNASFTLGHGFQFVSLSSPLHNHTLFPEKQIYTTSPLECGFGQSVTSVLPSSLPKPP
FGMLFGSQPGLYLSALDATHQQLTPSQELDDLIDSQKNLETSSAFQSSSQKLTSQKEQKNLESSTGFQIP
SQELASQIDPQKDIEPRTTYQIENFAQAFGSQFKSGSRVPMTFITNSNGEVDHRVRTSVSDFSGYTNMMS
DVSEPCSTRVKTPTSQSYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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