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Report for CCDS55562.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55562.1 Public Homo sapiens 1 NADK 24 110 108 CCDS HistoryNCBI Gene:65220Re-query CCDS DB by CCDS ID:55562.1Re-query CCDS DB by GeneID:65220See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55562.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378625.5 ENSP00000367890.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378625.5Link to Ensembl Protein Viewer:ENSP00000367890.1Re-query CCDS DB by Nucleotide ID:ENST00000378625Re-query CCDS DB by Protein ID:ENSP00000367890
Original member Current member NCBI NM_001198994.2 NP_001185923.1 Accepted alive Link to Nucleotide Sequence:NM_001198994.2Link to Protein Sequence:NP_001185923.1Re-query CCDS DB by Nucleotide ID:NM_001198994Re-query CCDS DB by Protein ID:NP_001185923Link to BLAST:NP_001185923.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001185923.1 591 O95544-2 591 100% 0 0

Chromosomal Locations for CCDS 55562.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 1752904 1753060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1753567 1753649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1754051 1754208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1754284 1754383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1754544 1754698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1755374 1755476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1756258 1756343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1756503 1756657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1757107 1757310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1759101 1759243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1759734 1759902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1761952 1762035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1765228 1765406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1776 nt):
ATGGAAATGGAACAAGAAAAAATGACCATGAATAAGGAATTGAGTCCAGACGCGGCTGCTTACTGCTGCT
CGGCCTGCCACGGCGATGAGACCTGGAGTTACAACCACCCCATCCGGGGCCGGGCCAAGTCTCGCAGCCT
GTCTGCCTCGCCCGCCCTGGGGAGCACCAAGGAGTTCAGGAGGACACGCTCTCTTCATGGGCCATGCCCG
GTGACCACTTTTGGACCAAAGGCCTGTGTGCTGCAGAACCCCCAGACCATCATAGCCACTCCTTTGTCAC
TCGCATCTCAGCTGCTGCCTTCACCAGCCGTCAGTCACTCGGGCCAGGGCGGGGTCACCGGACAGGTGCA
TGTTCTGCCTCAGCCCTCAGACCAGGGCGTACTCAGTGGTCCCCGAGCTGCCCGAGGCCAGACAGCCCCG
CAGGAGGAAGCGGTGACCCAGGAAGAGGTCGAGGCGCTGGTTTGTGGTCACACACAGCGGTGGGTGCCTG
GGCCGGTGTACGACGCCGCTGCTGGTGGCTCTGGCTGGGCTCAGCTGAGCCTCAGGGCTGGAATGGGTGT
AGGCCAGGCCACTGGGCACATTCAGGACCCCGCGAGCCAGCGGCTGACGTGGAACAAGTCCCCAAAGAGC
GTCCTTGTCATCAAGAAGATGAGAGATGCCAGCCTACTGCAGCCGTTCAAGGAGCTCTGCACGCACCTCA
TGGAGGCACGCGGGGCAGGGGGGAAGGGGGCCTGGGGTGCACATGGAGTTGGGGGGGCCTCCATCCACAT
CACCGCCCCGAGGGTGGGGTCTGCAGGTGGAATGAGCAGGTTGGCACTTTGCTTCCAGGAGAACATGATC
GTGTATGTGGAAAAGAAAGTGCTAGAAGACCCTGCCATCGCCAGCGATGAAAGCTTTGGGGCAGTGAAGA
AGAAATTCTGTACCTTTCGAGAAGATTATGATGACATTTCCAATCAGATAGACTTCATCATCTGCCTGGG
GGGAGACGGGACGCTGCTGTACGCTTCCTCGCTTTTCCAGGGCAGCGTCCCTCCGGTCATGGCCTTCCAC
CTGGGCTCCCTGGGCTTCCTGACCCCATTCAGCTTTGAGAACTTTCAGTCCCAAGTTACTCAGGTGATAG
AGGGGAACGCAGCTGTTGTTCTCCGGAGTCGGCTGAAGGTCAGGGTGGTGAAGGAGCTCCGGGGGAAGAA
GACGGCCGTGCACAATGGGCTGGGTGAGAACGGCTCGCAGGCTGCAGGCCTGGACATGGATGTCGGGAAG
CAGGCCATGCAGTACCAGGTCCTGAATGAGGTGGTGATTGACAGAGGCCCCTCCTCCTACCTGTCCAATG
TGGATGTCTACCTGGACGGACACCTCATCACCACGGTGCAGGGCGACGGAGTGATCGTGTCCACCCCGAC
GGGCAGCACGGCGTATGCGGCCGCGGCCGGGGCCTCCATGATCCACCCCAACGTGCCGGCCATCATGATC
ACGCCCATCTGCCCCCACTCGCTGTCCTTCCGGCCCATCGTGGTCCCCGCAGGGGTCGAGCTGAAGATCA
TGCTGTCACCTGAAGCAAGGAACACAGCATGGGTGTCCTTTGATGGACGGAAGAGACAAGAGATCCGCCA
TGGAGACAGCATCAGCATCACTACCTCATGCTACCCGCTCCCCTCCATCTGTGTGCGGGACCCCGTGAGC
GACTGGTTTGAGAGCCTCGCCCAGTGCCTGCATTGGAACGTCCGGAAGAAGCAAGCCCACTTCGAGGAGG
AGGAGGAGGAGGAGGAGGAGGGCTAG

Translation (591 aa):
MEMEQEKMTMNKELSPDAAAYCCSACHGDETWSYNHPIRGRAKSRSLSASPALGSTKEFRRTRSLHGPCP
VTTFGPKACVLQNPQTIIATPLSLASQLLPSPAVSHSGQGGVTGQVHVLPQPSDQGVLSGPRAARGQTAP
QEEAVTQEEVEALVCGHTQRWVPGPVYDAAAGGSGWAQLSLRAGMGVGQATGHIQDPASQRLTWNKSPKS
VLVIKKMRDASLLQPFKELCTHLMEARGAGGKGAWGAHGVGGASIHITAPRVGSAGGMSRLALCFQENMI
VYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDGTLLYASSLFQGSVPPVMAFH
LGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLKVRVVKELRGKKTAVHNGLGENGSQAAGLDMDVGK
QAMQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMI
TPICPHSLSFRPIVVPAGVELKIMLSPEARNTAWVSFDGRKRQEIRHGDSISITTSCYPLPSICVRDPVS
DWFESLAQCLHWNVRKKQAHFEEEEEEEEEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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