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Report for CCDS31150.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31150.1 Public Homo sapiens 10 DCLRE1C 24 110 108 CCDS HistoryNCBI Gene:64421Re-query CCDS DB by CCDS ID:31150.1Re-query CCDS DB by GeneID:64421See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31150.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378254.5 ENSP00000367502.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378254.5Link to Ensembl Protein Viewer:ENSP00000367502.1Re-query CCDS DB by Nucleotide ID:ENST00000378254Re-query CCDS DB by Protein ID:ENSP00000367502
Original member Current member EBI ENST00000378255.5 ENSP00000367503.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378255.5Link to Ensembl Protein Viewer:ENSP00000367503.1Re-query CCDS DB by Nucleotide ID:ENST00000378255Re-query CCDS DB by Protein ID:ENSP00000367503
Original member Current member EBI ENST00000378258.5 ENSP00000367506.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378258.5Link to Ensembl Protein Viewer:ENSP00000367506.1Re-query CCDS DB by Nucleotide ID:ENST00000378258Re-query CCDS DB by Protein ID:ENSP00000367506
Original member Current member EBI ENST00000396817.6 ENSP00000380030.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396817.6Link to Ensembl Protein Viewer:ENSP00000380030.2Re-query CCDS DB by Nucleotide ID:ENST00000396817Re-query CCDS DB by Protein ID:ENSP00000380030
Original member Current member NCBI NM_001033857.3 NP_001029029.1 Accepted alive Link to Nucleotide Sequence:NM_001033857.3Link to Protein Sequence:NP_001029029.1Re-query CCDS DB by Nucleotide ID:NM_001033857Re-query CCDS DB by Protein ID:NP_001029029Link to BLAST:NP_001029029.1
Original member Current member NCBI NM_001033858.3 NP_001029030.1 Accepted alive Link to Nucleotide Sequence:NM_001033858.3Link to Protein Sequence:NP_001029030.1Re-query CCDS DB by Nucleotide ID:NM_001033858Re-query CCDS DB by Protein ID:NP_001029030Link to BLAST:NP_001029030.1
Original member Current member NCBI NM_001289077.2 NP_001276006.1 Accepted alive Link to Nucleotide Sequence:NM_001289077.2Link to Protein Sequence:NP_001276006.1Re-query CCDS DB by Nucleotide ID:NM_001289077Re-query CCDS DB by Protein ID:NP_001276006Link to BLAST:NP_001276006.1
Original member Current member NCBI NM_001289079.2 NP_001276008.1 Accepted alive Link to Nucleotide Sequence:NM_001289079.2Link to Protein Sequence:NP_001276008.1Re-query CCDS DB by Nucleotide ID:NM_001289079Re-query CCDS DB by Protein ID:NP_001276008Link to BLAST:NP_001276008.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001029029.1 572 Q96SD1-2 572 100% 0 0
NP_001029030.1 572 Q96SD1-2 572 100% 0 0
NP_001276006.1 572 Q96SD1-2 572 100% 0 0
NP_001276008.1 572 Q96SD1-2 572 100% 0 0

Chromosomal Locations for CCDS 31150.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 14908408 14909330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14919738 14919832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14922981 14923069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14926843 14926897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14928016 14928152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14932854 14932955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14934380 14934520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14934703 14934775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14935463 14935564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 14936538 14936539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGTTTTTATTTCAGGGCAATAATGGAACTGTCCTGTACACAGGAGACTTCAGATTGGCGCAAGGAGAAG
CTGCTAGAATGGAGCTTCTGCACTCCGGGGGCAGAGTCAAAGACATCCAAAGTGTATATTTGGATACTAC
GTTCTGTGATCCAAGATTTTACCAAATTCCAAGTCGGGAGGAGTGTTTAAGTGGAGTCTTAGAGCTGGTC
CGAAGCTGGATCACTCGGAGCCCGTACCATGTTGTGTGGCTGAACTGCAAAGCGGCTTATGGCTATGAAT
ATCTGTTCACCAACCTTAGTGAAGAATTAGGAGTCCAGGTTCATGTGAATAAGCTAGACATGTTTAGGAA
CATGCCTGAGATCCTTCATCATCTCACAACAGACCGCAACACTCAGATCCATGCATGCCGGCATCCCAAG
GCAGAGGAATATTTTCAGTGGAGCAAATTACCCTGTGGAATTACTTCCAGAAATAGAATTCCACTCCACA
TAATCAGCATTAAGCCATCCACCATGTGGTTTGGAGAAAGGAGCAGAAAAACAAATGTAATTGTGAGGAC
TGGAGAGAGTTCATACAGAGCTTGTTTTTCTTTTCACTCCTCCTACAGTGAGATTAAAGATTTCTTGAGC
TACCTCTGTCCTGTGAACGCATATCCAAATGTCATTCCAGTTGGCACAACTATGGATAAAGTTGTCGAAA
TCTTAAAGCCTTTATGCCGGTCTTCCCAAAGTACGGAGCCAAAGTATAAACCACTGGGAAAACTGAAGAG
AGCTAGAACAGTTCACCGAGACTCAGAGGAGGAAGATGACTATCTCTTTGATGATCCTCTGCCAATACCT
TTAAGGCACAAAGTTCCATACCCGGAAACTTTTCACCCTGAGGTATTTTCAATGACTGCAGTATCAGAAA
AGCAGCCTGAAAAACTGAGACAAACCCCAGGATGCTGCAGAGCAGAGTGTATGCAGAGCTCTCGTTTCAC
AAACTTTGTAGATTGTGAAGAATCCAACAGTGAAAGTGAAGAAGAAGTAGGAATCCCAGCTTCACTGCAA
GGAGATCTGGGCTCTGTACTTCACCTGCAAAAGGCTGATGGGGATGTACCCCAGTGGGAAGTATTCTTTA
AAAGAAATGATGAAATCACAGATGAGAGTTTGGAAAACTTCCCTTCCTCCACAGTGGCAGGGGGATCTCA
GTCACCAAAGCTTTTCAGTGACTCTGATGGAGAATCAACTCACATCTCCTCCCAGAATTCTTCCCAGTCA
ACACACATAACAGAACAAGGAAGTCAAGGCTGGGACAGCCAATCTGATACTGTTTTGTTATCTTCCCAAG
AGAGAAACAGTGGGGATATTACTTCCTTGGACAAAGCTGACTACAGACCAACAATCAAAGAGAATATTCC
TGCCTCTCTCATGGAACAAAATGTAATTTGCCCAAAGGATACTTACTCTGATTTGAAAAGCAGAGATAAA
GATGTGACAATAGTTCCTAGTACTGGAGAACCAACTACTCTAAGCAGTGAGACACATATACCCGAGGAAA
AAAGTTTGCTAAATCTTAGCACAAATGCAGATTCCCAGAGCTCTTCTGATTTTGAAGTTCCCTCAACTCC
AGAAGCTGAGTTACCTAAACGAGAGCATTTACAATATTTATATGAGAAGCTGGCAACTGGTGAGAGTATA
GCAGTCAAAAAAAGAAAATGCTCACTCTTAGATACCTAA

Translation (572 aa):
MFLFQGNNGTVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELV
RSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMPEILHHLTTDRNTQIHACRHPK
AEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKTNVIVRTGESSYRACFSFHSSYSEIKDFLS
YLCPVNAYPNVIPVGTTMDKVVEILKPLCRSSQSTEPKYKPLGKLKRARTVHRDSEEEDDYLFDDPLPIP
LRHKVPYPETFHPEVFSMTAVSEKQPEKLRQTPGCCRAECMQSSRFTNFVDCEESNSESEEEVGIPASLQ
GDLGSVLHLQKADGDVPQWEVFFKRNDEITDESLENFPSSTVAGGSQSPKLFSDSDGESTHISSQNSSQS
THITEQGSQGWDSQSDTVLLSSQERNSGDITSLDKADYRPTIKENIPASLMEQNVICPKDTYSDLKSRDK
DVTIVPSTGEPTTLSSETHIPEEKSLLNLSTNADSQSSSDFEVPSTPEAELPKREHLQYLYEKLATGESI
AVKKRKCSLLDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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