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Report for CCDS30911.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30911.1 Public Homo sapiens 1 CRP 24 110 108 CCDS HistoryNCBI Gene:1401Re-query CCDS DB by CCDS ID:30911.1Re-query CCDS DB by GeneID:1401See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30911.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000255030.9 ENSP00000255030.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000255030.9Link to Ensembl Protein Viewer:ENSP00000255030.5Re-query CCDS DB by Nucleotide ID:ENST00000255030Re-query CCDS DB by Protein ID:ENSP00000255030
Original member Current member NCBI NM_000567.3 NP_000558.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000567.3Link to Protein Sequence:NP_000558.2Re-query CCDS DB by Nucleotide ID:NM_000567Re-query CCDS DB by Protein ID:NP_000558Link to BLAST:NP_000558.2
Original member Current member NCBI NM_001329057.2 NP_001315986.1 Accepted alive Link to Nucleotide Sequence:NM_001329057.2Link to Protein Sequence:NP_001315986.1Re-query CCDS DB by Nucleotide ID:NM_001329057Re-query CCDS DB by Protein ID:NP_001315986Link to BLAST:NP_001315986.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000558.2 224 P02741-1 224 100% 0 0
NP_001315986.1 224 P02741-1 224 100% 0 0

Chromosomal Locations for CCDS 30911.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 159713525 159714138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 159714425 159714485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (675 nt):
ATGGAGAAGCTGTTGTGTTTCTTGGTCTTGACCAGCCTCTCTCATGCTTTTGGCCAGACAGACATGTCGA
GGAAGGCTTTTGTGTTTCCCAAAGAGTCGGATACTTCCTATGTATCCCTCAAAGCACCGTTAACGAAGCC
TCTCAAAGCCTTCACTGTGTGCCTCCACTTCTACACGGAACTGTCCTCGACCCGTGGGTACAGTATTTTC
TCGTATGCCACCAAGAGACAAGACAATGAGATTCTCATATTTTGGTCTAAGGATATAGGATACAGTTTTA
CAGTGGGTGGGTCTGAAATATTATTCGAGGTTCCTGAAGTCACAGTAGCTCCAGTACACATTTGTACAAG
CTGGGAGTCCGCCTCAGGGATCGTGGAGTTCTGGGTAGATGGGAAGCCCAGGGTGAGGAAGAGTCTGAAG
AAGGGATACACTGTGGGGGCAGAAGCAAGCATCATCTTGGGGCAGGAGCAGGATTCCTTCGGTGGGAACT
TTGAAGGAAGCCAGTCCCTGGTGGGAGACATTGGAAATGTGAACATGTGGGACTTTGTGCTGTCACCAGA
TGAGATTAACACCATCTATCTTGGCGGGCCCTTCAGTCCTAATGTCCTGAACTGGCGGGCACTGAAGTAT
GAAGTGCAAGGCGAAGTGTTCACCAAACCCCAGCTGTGGCCCTGA

Translation (224 aa):
MEKLLCFLVLTSLSHAFGQTDMSRKAFVFPKESDTSYVSLKAPLTKPLKAFTVCLHFYTELSSTRGYSIF
SYATKRQDNEILIFWSKDIGYSFTVGGSEILFEVPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKSLK
KGYTVGAEASIILGQEQDSFGGNFEGSQSLVGDIGNVNMWDFVLSPDEINTIYLGGPFSPNVLNWRALKY
EVQGEVFTKPQLWP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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