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Report for CCDS3756.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3756.1 Public Homo sapiens 4 IL15 24 110 108 CCDS HistoryNCBI Gene:3600Re-query CCDS DB by CCDS ID:3756.1Re-query CCDS DB by GeneID:3600See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 3756.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394159.2 ENSP00000377714.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394159.2Link to Ensembl Protein Viewer:ENSP00000377714.1Re-query CCDS DB by Nucleotide ID:ENST00000394159Re-query CCDS DB by Protein ID:ENSP00000377714
Original member Current member EBI ENST00000514653.5 ENSP00000422271.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000514653.5Link to Ensembl Protein Viewer:ENSP00000422271.1Re-query CCDS DB by Nucleotide ID:ENST00000514653Re-query CCDS DB by Protein ID:ENSP00000422271
Original member Current member EBI ENST00000477265.5 ENSP00000436914.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000477265.5Link to Ensembl Protein Viewer:ENSP00000436914.1Re-query CCDS DB by Nucleotide ID:ENST00000477265Re-query CCDS DB by Protein ID:ENSP00000436914
Original member Current member NCBI NM_172175.3 NP_751915.1 Accepted alive Link to Nucleotide Sequence:NM_172175.3Link to Protein Sequence:NP_751915.1Re-query CCDS DB by Nucleotide ID:NM_172175Re-query CCDS DB by Protein ID:NP_751915Link to BLAST:NP_751915.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_751915.1 135 P40933-2 135 100% 0 0

Chromosomal Locations for CCDS 3756.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 141721149 141721177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 141721924 141722008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 141727940 141727984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 141729847 141729984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 141732738 141732848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (408 nt):
ATGGTATTGGGAACCATAGATTTGTGCAGCTGTTTCAGTGCAGGGCTTCCTAAAACAGAAGCCAACTGGG
TGAATGTAATAAGTGATTTGAAAAAAATTGAAGATCTTATTCAATCTATGCATATTGATGCTACTTTATA
TACGGAAAGTGATGTTCACCCCAGTTGCAAAGTAACAGCAATGAAGTGCTTTCTCTTGGAGTTACAAGTT
ATTTCACTTGAGTCCGGAGATGCAAGTATTCATGATACAGTAGAAAATCTGATCATCCTAGCAAACAACA
GTTTGTCTTCTAATGGGAATGTAACAGAATCTGGATGCAAAGAATGTGAGGAACTGGAGGAAAAAAATAT
TAAAGAATTTTTGCAGAGTTTTGTACATATTGTCCAAATGTTCATCAACACTTCTTGA

Translation (135 aa):
MVLGTIDLCSCFSAGLPKTEANWVNVISDLKKIEDLIQSMHIDATLYTESDVHPSCKVTAMKCFLLELQV
ISLESGDASIHDTVENLIILANNSLSSNGNVTESGCKECEELEEKNIKEFLQSFVHIVQMFINTS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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