NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS76524.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76524.1 Public Homo sapiens 12 MFAP5 24 110 108 CCDS HistoryNCBI Gene:8076Re-query CCDS DB by CCDS ID:76524.1Re-query CCDS DB by GeneID:8076See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76524.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535336.5 ENSP00000438525.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535336.5Link to Ensembl Protein Viewer:ENSP00000438525.1Re-query CCDS DB by Nucleotide ID:ENST00000535336Re-query CCDS DB by Protein ID:ENSP00000438525
Original member Current member NCBI NM_001297712.2 NP_001284641.1 Accepted alive Link to Nucleotide Sequence:NM_001297712.2Link to Protein Sequence:NP_001284641.1Re-query CCDS DB by Nucleotide ID:NM_001297712Re-query CCDS DB by Protein ID:NP_001284641Link to BLAST:NP_001284641.1

Chromosomal Locations for CCDS 76524.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 8648091 8648203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8654437 8654481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8655415 8655447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8655786 8655830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8660863 8660898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 8662047 8662104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (330 nt):
ATGTCGCTCTTGGGACCCAAGGTGCTGCTGTTTCTTGCTGCATTCATCATCACCTCTGACTGGATACCCC
TGGGGGTCAATAGTCAACGAGGAGACGATGTGACTCAAGCGACTCCAGAAACATTCACAGAAGATCCTAA
TCTGGTGAATGATCCCGCTACAGATGAAACAGTTTTGGCTGTTTTGGCTGATATTGCACCTTCCACAGAT
GACTTGGATGAGCTTTGCCGTCAGATGGCTGGTCTGCCCCCTAGGAGACTCCGTCGCTCCAATTACTTCC
GACTTCCTCCCTGTGAAAATGTGGATTTGCAGAGACCCAATGGTCTGTGA

Translation (109 aa):
MSLLGPKVLLFLAAFIITSDWIPLGVNSQRGDDVTQATPETFTEDPNLVNDPATDETVLAVLADIAPSTD
DLDELCRQMAGLPPRRLRRSNYFRLPPCENVDLQRPNGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH