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Report for CCDS6989.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6989.1 Public Homo sapiens 9 PIERCE1 24 110 108 CCDS HistoryNCBI Gene:138162Re-query CCDS DB by CCDS ID:6989.1Re-query CCDS DB by GeneID:138162See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6989.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371789.7 ENSP00000360854.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371789.7Link to Ensembl Protein Viewer:ENSP00000360854.3Re-query CCDS DB by Nucleotide ID:ENST00000371789Re-query CCDS DB by Protein ID:ENSP00000360854
Original member Current member EBI ENST00000371791.5 ENSP00000360856.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371791.5Link to Ensembl Protein Viewer:ENSP00000360856.1Re-query CCDS DB by Nucleotide ID:ENST00000371791Re-query CCDS DB by Protein ID:ENSP00000360856
Original member Current member NCBI NM_144654.3 NP_653255.1 Accepted alive Link to Nucleotide Sequence:NM_144654.3Link to Protein Sequence:NP_653255.1Re-query CCDS DB by Nucleotide ID:NM_144654Re-query CCDS DB by Protein ID:NP_653255Link to BLAST:NP_653255.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653255.1 92 Q5BN46-2 92 100% 0 0

Chromosomal Locations for CCDS 6989.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 135495513 135495569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135498585 135498663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 135499709 135499851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (279 nt):
ATGGCTGAGGAATGCCCCAGAGCGTGCGCGGAGCCTGTGGCGCCCAAGGCCACGGCCCCGCCGGAGAGGA
CCAGCGACTACTACCGCGTGAGCGCGGACCTGCCGGGCAGGTTCAACAACCCGGGGTGGTTCCGGGGCTA
CAGGACCCAGAAGGCTGTCTCCGTGTACAGGACCAGTAACCAGGCTTACGGGAGCAGAGCCCCCACCGTG
CACGAGATGCCTCGGGTGGAATGTTCCGGAACAATACTCTCAATGTTTACCTGGAGAAAAGCATCGTGA

Translation (92 aa):
MAEECPRACAEPVAPKATAPPERTSDYYRVSADLPGRFNNPGWFRGYRTQKAVSVYRTSNQAYGSRAPTV
HEMPRVECSGTILSMFTWRKAS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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