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Report for CCDS7697.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7697.1 Public Homo sapiens 11 RNH1 24 110 108 CCDS HistoryNCBI Gene:6050Re-query CCDS DB by CCDS ID:7697.1Re-query CCDS DB by GeneID:6050See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7697.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354420.7 ENSP00000346402.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354420.7Link to Ensembl Protein Viewer:ENSP00000346402.2Re-query CCDS DB by Nucleotide ID:ENST00000354420Re-query CCDS DB by Protein ID:ENSP00000346402
Original member Current member EBI ENST00000356187.9 ENSP00000348515.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356187.9Link to Ensembl Protein Viewer:ENSP00000348515.5Re-query CCDS DB by Nucleotide ID:ENST00000356187Re-query CCDS DB by Protein ID:ENSP00000348515
Original member Current member EBI ENST00000397604.7 ENSP00000380729.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397604.7Link to Ensembl Protein Viewer:ENSP00000380729.3Re-query CCDS DB by Nucleotide ID:ENST00000397604Re-query CCDS DB by Protein ID:ENSP00000380729
Original member Current member EBI ENST00000397614.5 ENSP00000380738.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397614.5Link to Ensembl Protein Viewer:ENSP00000380738.1Re-query CCDS DB by Nucleotide ID:ENST00000397614Re-query CCDS DB by Protein ID:ENSP00000380738
Original member Current member EBI ENST00000397615.6 ENSP00000380739.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397615.6Link to Ensembl Protein Viewer:ENSP00000380739.2Re-query CCDS DB by Nucleotide ID:ENST00000397615Re-query CCDS DB by Protein ID:ENSP00000380739
Original member Current member EBI ENST00000438658.6 ENSP00000416589.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000438658.6Link to Ensembl Protein Viewer:ENSP00000416589.2Re-query CCDS DB by Nucleotide ID:ENST00000438658Re-query CCDS DB by Protein ID:ENSP00000416589
Original member Current member EBI ENST00000534797.5 ENSP00000433999.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000534797.5Link to Ensembl Protein Viewer:ENSP00000433999.1Re-query CCDS DB by Nucleotide ID:ENST00000534797Re-query CCDS DB by Protein ID:ENSP00000433999
Original member Current member EBI ENST00000533410.5 ENSP00000435594.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533410.5Link to Ensembl Protein Viewer:ENSP00000435594.1Re-query CCDS DB by Nucleotide ID:ENST00000533410Re-query CCDS DB by Protein ID:ENSP00000435594
Original member Current member NCBI NM_002939.4 NP_002930.2 Accepted alive Link to Nucleotide Sequence:NM_002939.4Link to Protein Sequence:NP_002930.2Re-query CCDS DB by Nucleotide ID:NM_002939Re-query CCDS DB by Protein ID:NP_002930Link to BLAST:NP_002930.2
Original member Current member NCBI NM_203383.2 NP_976317.1 Accepted alive Link to Nucleotide Sequence:NM_203383.2Link to Protein Sequence:NP_976317.1Re-query CCDS DB by Nucleotide ID:NM_203383Re-query CCDS DB by Protein ID:NP_976317Link to BLAST:NP_976317.1
Original member Current member NCBI NM_203384.2 NP_976318.1 Accepted alive Link to Nucleotide Sequence:NM_203384.2Link to Protein Sequence:NP_976318.1Re-query CCDS DB by Nucleotide ID:NM_203384Re-query CCDS DB by Protein ID:NP_976318Link to BLAST:NP_976318.1
Original member Current member NCBI NM_203385.2 NP_976319.1 Accepted alive Link to Nucleotide Sequence:NM_203385.2Link to Protein Sequence:NP_976319.1Re-query CCDS DB by Nucleotide ID:NM_203385Re-query CCDS DB by Protein ID:NP_976319Link to BLAST:NP_976319.1
Original member Current member NCBI NM_203386.3 NP_976320.1 Accepted alive Link to Nucleotide Sequence:NM_203386.3Link to Protein Sequence:NP_976320.1Re-query CCDS DB by Nucleotide ID:NM_203386Re-query CCDS DB by Protein ID:NP_976320Link to BLAST:NP_976320.1
Original member Current member NCBI NM_203387.3 NP_976321.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_203387.3Link to Protein Sequence:NP_976321.1Re-query CCDS DB by Nucleotide ID:NM_203387Re-query CCDS DB by Protein ID:NP_976321Link to BLAST:NP_976321.1
Original member Current member NCBI NM_203388.3 NP_976322.1 Accepted alive Link to Nucleotide Sequence:NM_203388.3Link to Protein Sequence:NP_976322.1Re-query CCDS DB by Nucleotide ID:NM_203388Re-query CCDS DB by Protein ID:NP_976322Link to BLAST:NP_976322.1
Original member Current member NCBI NM_203389.3 NP_976323.1 Accepted alive Link to Nucleotide Sequence:NM_203389.3Link to Protein Sequence:NP_976323.1Re-query CCDS DB by Nucleotide ID:NM_203389Re-query CCDS DB by Protein ID:NP_976323Link to BLAST:NP_976323.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002930.2 461 P13489 461 100% 0 0
NP_976317.1 461 P13489 461 100% 0 0
NP_976318.1 461 P13489 461 100% 0 0
NP_976319.1 461 P13489 461 100% 0 0
NP_976320.1 461 P13489 461 100% 0 0
NP_976321.1 461 P13489 461 100% 0 0
NP_976322.1 461 P13489 461 100% 0 0
NP_976323.1 461 P13489 461 100% 0 0

Chromosomal Locations for CCDS 7697.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 494691 494778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 494883 495053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 497971 498141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 498457 498627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 498763 498933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 499015 499185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 499829 499999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 500484 500654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 502062 502162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1386 nt):
ATGAGCCTGGACATCCAGAGCCTGGACATCCAGTGTGAGGAGCTGAGCGACGCTAGATGGGCCGAGCTCC
TCCCTCTGCTCCAGCAGTGCCAAGTGGTCAGGCTGGACGACTGTGGCCTCACGGAAGCACGGTGCAAGGA
CATCAGCTCTGCACTTCGAGTCAACCCTGCACTGGCAGAGCTCAACCTGCGCAGCAACGAGCTGGGCGAT
GTCGGCGTGCATTGCGTGCTCCAGGGCCTGCAGACCCCCTCCTGCAAGATCCAGAAGCTGAGCCTCCAGA
ACTGCTGCCTGACGGGGGCCGGCTGCGGGGTCCTGTCCAGCACACTACGCACCCTGCCCACCCTGCAGGA
GCTGCACCTCAGCGACAACCTCTTGGGGGATGCGGGCCTGCAGCTGCTCTGCGAAGGACTCCTGGACCCC
CAGTGCCGCCTGGAAAAGCTGCAGCTGGAGTATTGCAGCCTCTCGGCTGCCAGCTGCGAGCCCCTGGCCT
CCGTGCTCAGGGCCAAGCCGGACTTCAAGGAGCTCACGGTTAGCAACAACGACATCAATGAGGCTGGCGT
CCGTGTGCTGTGCCAGGGCCTGAAGGACTCCCCCTGCCAGCTGGAGGCGCTCAAGCTGGAGAGCTGCGGT
GTGACATCAGACAACTGCCGGGACCTGTGCGGCATTGTGGCCTCCAAGGCCTCGCTGCGGGAGCTGGCCC
TGGGCAGCAACAAGCTGGGTGATGTGGGCATGGCGGAGCTGTGCCCAGGGCTGCTCCACCCCAGCTCCAG
GCTCAGGACCCTGTGGATCTGGGAGTGTGGCATCACTGCCAAGGGCTGCGGGGATCTGTGCCGTGTCCTC
AGGGCCAAGGAGAGCCTGAAGGAGCTCAGCCTGGCCGGCAACGAGCTGGGGGATGAGGGTGCCCGACTGC
TGTGTGAGACCCTGCTGGAACCTGGCTGCCAGCTGGAGTCGCTGTGGGTGAAGTCCTGCAGCTTCACAGC
CGCCTGCTGCTCCCACTTCAGCTCAGTGCTGGCCCAGAACAGGTTTCTCCTGGAGCTACAGATAAGCAAC
AACAGGCTGGAGGATGCGGGCGTGCGGGAGCTGTGCCAGGGCCTGGGCCAGCCTGGCTCTGTGCTGCGGG
TGCTCTGGTTGGCCGACTGCGATGTGAGTGACAGCAGCTGCAGCAGCCTCGCCGCAACCCTGTTGGCCAA
CCACAGCCTGCGTGAGCTGGACCTCAGCAACAACTGCCTGGGGGACGCCGGCATCCTGCAGCTGGTGGAG
AGCGTCCGGCAGCCGGGCTGCCTCCTGGAGCAGCTGGTCCTGTACGACATTTACTGGTCTGAGGAGATGG
AGGACCGGCTGCAGGCCCTGGAGAAGGACAAGCCATCCCTGAGGGTCATCTCCTGA

Translation (461 aa):
MSLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGD
VGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDP
QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCG
VTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVL
RAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISN
NRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVE
SVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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