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Report for CCDS63627.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
63627.1 Public Homo sapiens 3 SLC26A6 24 110 108 CCDS HistoryNCBI Gene:65010Re-query CCDS DB by CCDS ID:63627.1Re-query CCDS DB by GeneID:65010See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 63627.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337000.12 ENSP00000337648.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337000.12Link to Ensembl Protein Viewer:ENSP00000337648.8Re-query CCDS DB by Nucleotide ID:ENST00000337000Re-query CCDS DB by Protein ID:ENSP00000337648
Original member Current member NCBI NM_001281733.2 NP_001268662.1 Accepted alive Link to Nucleotide Sequence:NM_001281733.2Link to Protein Sequence:NP_001268662.1Re-query CCDS DB by Nucleotide ID:NM_001281733Re-query CCDS DB by Protein ID:NP_001268662Link to BLAST:NP_001268662.1

Chromosomal Locations for CCDS 63627.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 48625986 48626000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48626218 48626354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48626631 48626685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48626876 48627052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48627946 48628038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48628434 48628541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48628622 48628714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48629642 48629711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48629872 48629978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48630062 48630157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48630438 48630515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48630607 48630720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48630993 48631140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48631224 48631306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48631649 48631797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48632974 48633084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48633251 48633390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48633477 48633635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 48635371 48635393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1956 nt):
ATGGGGCTGGCGGATGCGTCGGGACCGAGGGACACACAGGCACTGCTGTCTGCAACACAAGCAATGGACC
TGCGGAGGCGAGACTACCACATGGAACGGCCGCTGCTGAACCAGGAGCATTTGGAGGAGCTGGGGCGCTG
GGGCTCAGCACCTAGGACCCACCAGTGGCGGACCTGGTTGCAGTGCTCCCGTGCTCGGGCCTATGCCCTT
CTGCTCCAACACCTCCCGGTTTTGGTCTGGTTACCCCGGTATCCTGTGCGTGACTGGCTCCTGGGTGACC
TGTTATCCGGCCTGAGTGTGGCCATCATGCAGCTTCCGCAGGGCTTGGCCTACGCCCTCCTGGCTGGATT
GCCCCCCGTGTTTGGCCTCTATAGCTCCTTCTACCCTGTCTTCATCTACTTCCTGTTTGGCACTTCCCGG
CACATCTCCGTGGTGCTGGAGGTCTGCTGGAAGCTGCCCCAGAGCAAGGTTGGCACCGTGGTCACTGCAG
CTGTGGCTGGGGTGGTGCTCGTGGTGGTGAAGCTGTTGAATGACAAGCTGCAGCAGCAGCTGCCCATGCC
GATACCCGGGGAGCTGCTCACGCTCATCGGGGCCACAGGCATCTCCTATGGCATGGGTCTAAAGCACAGA
TTTGAGGTAGATGTCGTGGGCAACATCCCTGCAGGGCTGGTGCCCCCAGTGGCCCCCAACACCCAGCTGT
TCTCAAAGCTCGTGGGCAGCGCCTTCACCATCGCTGTGGTTGGGTTTGCCATTGCCATCTCACTGGGGAA
GATCTTCGCCCTGAGGCACGGCTACCGGGTGGACAGCAACCAGGAGCTGGTGGCCCTGGGCCTCAGTAAC
CTTATCGGAGGCATCTTCCAGTGCTTCCCCGTGAGTTGCTCTATGTCTCGGAGCCTGGTACAGGAGAGCA
CCGGGGGCAACTCGCAGGTTGCTGGAGCCATCTCTTCCCTTTTCATCCTCCTCATCATTGTCAAACTTGG
GGAACTCTTCCATGACCTGCCCAAGGCGGTCCTGGCAGCCATCATCATTGTGAACCTGAAGGGCATGCTG
AGGCAGCTCAGCGACATGCGCTCCCTCTGGAAGGCCAATCGGGCGGATCTGCTTATCTGGCTGGTGACCT
TCACGGCCACCATCTTGCTGAACCTGGACCTTGGCTTGGTGGTTGCGGTCATCTTCTCCCTGCTGCTCGT
GGTGGTCCGGACACAGATGCCCCACTACTCTGTCCTGGGGCAGGTGCCAGACACGGATATTTACAGAGAT
GTGGCAGAGTACTCAGAGGCCAAGGAAGTCCGGGGGGTGAAGGTCTTCCGCTCCTCGGCCACCGTGTACT
TTGCCAATGCTGAGTTCTACAGTGATGCGCTGAAGCAGAGGTGTGGTGTGGATGTCGACTTCCTCATCTC
CCAGAAGAAGAAACTGCTCAAGAAGCAGGAGCAGCTGAAGCTGAAGCAACTGCAGAAAGAGGAGAAGCTT
CGGAAACAGGCTGCCTCCCCCAAGGGCGCCTCAGTTTCCATTAATGTCAACACCAGCCTTGAAGACATGA
GGAGCAACAACGTTGAGGACTGCAAGATGATGGTGAGCTCAGGAGATAAGATGGAAGATGCAACAGCCAA
TGGTCAAGAAGACTCCAAGGCCCCAGATGGGTCCACACTGAAGGCCCTGGGCCTGCCTCAGCCAGACTTC
CACAGCCTCATCCTGGACCTGGGTGCCCTCTCCTTTGTGGACACTGTGTGCCTCAAGAGCCTGAAGAATA
TTTTCCATGACTTCCGGGAGATTGAGGTGGAGGTGTACATGGCGGCCTGCCACAGCCCTGTGGTCAGCCA
GCTTGAGGCTGGGCACTTCTTCGATGCATCCATCACCAAGAAGCATCTCTTTGCCTCTGTCCATGATGCT
GTCACCTTTGCCCTCCAACACCCGAGGCCTGTCCCCGACAGCCCTGTTTCGGTCACCAGACTCTGA

Translation (651 aa):
MGLADASGPRDTQALLSATQAMDLRRRDYHMERPLLNQEHLEELGRWGSAPRTHQWRTWLQCSRARAYAL
LLQHLPVLVWLPRYPVRDWLLGDLLSGLSVAIMQLPQGLAYALLAGLPPVFGLYSSFYPVFIYFLFGTSR
HISVVLEVCWKLPQSKVGTVVTAAVAGVVLVVVKLLNDKLQQQLPMPIPGELLTLIGATGISYGMGLKHR
FEVDVVGNIPAGLVPPVAPNTQLFSKLVGSAFTIAVVGFAIAISLGKIFALRHGYRVDSNQELVALGLSN
LIGGIFQCFPVSCSMSRSLVQESTGGNSQVAGAISSLFILLIIVKLGELFHDLPKAVLAAIIIVNLKGML
RQLSDMRSLWKANRADLLIWLVTFTATILLNLDLGLVVAVIFSLLLVVVRTQMPHYSVLGQVPDTDIYRD
VAEYSEAKEVRGVKVFRSSATVYFANAEFYSDALKQRCGVDVDFLISQKKKLLKKQEQLKLKQLQKEEKL
RKQAASPKGASVSINVNTSLEDMRSNNVEDCKMMVSSGDKMEDATANGQEDSKAPDGSTLKALGLPQPDF
HSLILDLGALSFVDTVCLKSLKNIFHDFREIEVEVYMAACHSPVVSQLEAGHFFDASITKKHLFASVHDA
VTFALQHPRPVPDSPVSVTRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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