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Report for CCDS42252.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42252.1 Public Homo sapiens 17 NEURL4 24 110 108 CCDS HistoryNCBI Gene:84461Re-query CCDS DB by CCDS ID:42252.1Re-query CCDS DB by GeneID:84461See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42252.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315614.11 ENSP00000319826.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315614.11Link to Ensembl Protein Viewer:ENSP00000319826.7Re-query CCDS DB by Nucleotide ID:ENST00000315614Re-query CCDS DB by Protein ID:ENSP00000319826
Original member Current member NCBI NM_001005408.2 NP_001005408.1 Accepted alive Link to Nucleotide Sequence:NM_001005408.2Link to Protein Sequence:NP_001005408.1Re-query CCDS DB by Nucleotide ID:NM_001005408Re-query CCDS DB by Protein ID:NP_001005408Link to BLAST:NP_001005408.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005408.1 1560 Q96JN8-2 1560 100% 0 0

Chromosomal Locations for CCDS 42252.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7316123 7316327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7317205 7317370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7317461 7317573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7317788 7317932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7318065 7318172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7318269 7318356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7318495 7318674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7319050 7319208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7320759 7320923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7321112 7321273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7321361 7321459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7321560 7321787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7321865 7322010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7322735 7322866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7322954 7323123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7323485 7323563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7323647 7323723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7323814 7324012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7324108 7324270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7324395 7324480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7324799 7324980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7325209 7325473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7325641 7325713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7326255 7326343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7326437 7326548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7326711 7327009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7327165 7327230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7327440 7327884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7329031 7329312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4683 nt):
ATGGCGGCAGGGTCGGGTGGGAGTGGGGGCTCTGGGGGAGGCCCTGGACCGGGGCCGGGCGGGGGTGGGG
GCCCCAGCGGGAGCGGCTCAGGACCGGGGTCCAACGGGGGTCTGGGCAGCGGCGGGGAACTGCACCCGCG
CACTGGGCGCTTGGTGAGCCTGTCGGCCTGTGGGCGTACGGCGCGGCGGCAGCAGCCGGGCCAGGAGTTT
AACCACGGGCTGGTGTTGAGCCGAGAACCCTTGCGCGATGGACGCGTCTTCACCGTCCGCATCGACCGCA
AGGTCAACTCCTGGAGCGGCTCCATTGAGATTGGGGTGACAGCGCTGGACCCCAGTGTGCTGGACTTTCC
AAGCAGTGCCACGGGCCTGAAGGGGGGCTCGTGGGTAGTGTCGGGCTGCTCTGTGCTGAGAGATGGACGC
TCTGTGTTGGAGGAGTATGGTCAGGACCTGGACCAGCTTGGTGAAGGGGACCGCGTGGGCGTGGAGCGCA
CAGTTGCTGGGGAGCTTCGGCTCTGGGTGAATGGGCGGGATTGCGGTGTGGCTGCCACAGGCCTGCCCCC
TCGTGTCTGGGCCGTCGTGGACCTTTATGGCAAGTGCACCCAGATCACCGTGCTACCCCCTGAGCCAGGC
TTCAGCCCCCCTACTCCCATCCCCACACCTCCCCTCGAGCCCTTGGCCCCCACTGAAGACTCTGCCTTGG
CTGAACAGGGGACCTCTGCAGATGAAGCCTTCATGGTGTCCCCAGCGCAGGCCCGGCCGGAGACGTTTCC
TAACAGCCTTGAGTCGCATAATGACTTTGCCAACATGGAGCTGTCTGAGGTGGTGAGCAACACCATCCTG
TCTGCCTACAATGGAGGGCTCCTGAATGTGAACCTGAGCTCCCCACCGGCAGGGGAAGGCCTGGGATCTA
GCGGTGCTGCCACCTCGCCCATTCTCACTTCCAACGATGCCCTGCTCTTTCATGAAAAGTGCGGGACCCT
CATCAAACTCAGCAACAATAATAAGACGGCTGAGCGCCGGCGGCCCCTGGATGAATTCAACAATGGGGTT
GTCATGACCAATCGCCCCCTTCGGGACAATGAGATGTTTGAGATCCGTATCGACAAGCTTGTTGATAAGT
GGTCAGGCTCCATTGAGATTGGGGTCACCACCCACAACCCCAACAGTTTGGAGTACCCAGCCACCATGAC
CAACCTCCAGTCAGGCACCATCATGATGAGCGGCTGTGGAATCCTGACCAATGGCAAGGGCACCCGCCGG
GAGTACTGCGAATTCAGTCTGGATGAGTTGCAGGAGGGTGACCACATTGGCCTCACAAGGAAGTCCAACT
CTGCCCTACACTTCTTCATTAATGGTATCGATCAGGGAGTGGCAACCCCCTTGACGCCCCCAGTGGTGTA
TGGTGTGGTGGACTTGTACGGGATGGCAGTGAAGGTGACCATCGTCCACAATAACAACCACAGTGACCGT
CTCCGCCGAAACAACGCCATCCTGCGGGCGCTGTCCCCCGAGGGTGCTCTCCGCCGTGCTGCCCCTGCCG
CCCAGGCAGAACCTGAGCGCCTGCTCTTCCACCCCAACTGTGGGCAGAAGGCAGCCATCACCCACGAGGG
ACGCACTGCCCTGAGGCCCCATGCCACCGATGACTTCAATCACGGCGTGGTGCTGAGCAGCAGAGCCCTG
CGGGATGGAGAGGTGTTCCAGGTGCGCATCGACAAGATGGTGGACAAATGGGCTGGCTCCATTGAAATTG
GTGTCACCACCCACAACCCTGCCTACCTCCAGTTGCCCTCCACCATGACCAACTTGCGCTCTGGGACCTG
GATGATGACTGGGAATGGGGTGATGCACAATGGGACGACCATCCTGGATGAATACGGGCACAATCTGGAC
CGCCTCAAGGCAGGGGACACGGTGGGCGTGGTACGGCGGGAGGACGGGACTCTCCACTTCTTTGTCAATG
GGATGACTCAGGGCCCTGCTGCCTGGAACGTGCCCCCGGGCGTCTATGCTGTCGTCGATCTCTATGGCCA
GGCGGCCCAGGCCACCATTGTGGACGACGTGGAGGTGGCTCCAGTTCCTGAACCACTCCCTGAGGGGAAC
AACCAGGTGTCTCCAAGCTCTCCGTCCTCAGGGGCCGGGGGCTCTGACCTGCGCTTCCATCAGCTGCACG
GCAGTAACGCAGTCATCACTAACGGGGGCCGCACCGCCCTCCGCCACAACTGTCGCAGCGAGTTTAATGA
CGCCATCGTCATCTCCAACCGGGCCCTGCGGGATGGAGAGCTGTTTGAAATTGTCATTCAGAAGATGGTG
GACCGCTGGTCAGGCTCCATTGAGGCTGGAGTGACTGCTATTCGGCCTGAAGACCTGGAATTCCCCAACA
CCATGACAGACATTGACTATGACACATGGATGCTGAGTGGTACAGCCATCATGCAAGACGGTAACACGAT
GCGCAACAATTATGGGTGTGACCTGGATGCGCTGGGCACAGGTGCACGCATTGGCATGATGCGAACTGCC
AAGGGCGACCTGCACTACTTCATCAACGGCCAGGACCAAGGCGCTGCCTGCTCGGGCCTGCCTCCGGAGG
TGTATGCGGTAGTCGATCTCTATGGCCAGTGTGTCCAAGTGTCCATCACCAATGCCACCGGCCCCATGGA
CAACAGCCTGGCGACCAGCAACACTGCCACCGAGAAGTCCTTCCCACTGCACTCCCCAGTGGCTGGCGTG
GCTCACCGATTCCACAGTACTTGCGGCAAGAACGTCACTCTAGAGGAGGATGGCACGAGGGCAGTGCGTG
CCGCTGGCTATGCTCATGGCCTTGTCTTCAGTACCAAGGAGCTGAGGGCTGAGGAAGTCTTTGAGGTGAA
AGTGGAAGAGCTAGATGAGAAGTGGGCAGGTTCCCTGCGGCTGGGGCTGACCACACTAGCACCGGGGGAG
ATGGGACCCGGGGCAGGCGGTGGTGGCCCAGGGCTGCCTCCTTCCCTGCCAGAGCTCCGGACGAAGACCA
CTTGGATGGTATCCAGCTGTGAAGTGAGGCGTGATGGGCAGCTCCAGAGGATGAACTATGGCCGGAACCT
AGAGAGGCTGGGGGTGGGGAGCCGTGTGGGTGTTCGTCGGGGGGCAGATGACACGATGCACATCCTGGTG
GATGGAGAGGATATGGGGCCTGCAGCCACTGGCATTGCCAAGAACGTGTGGGCTGTGTTGGATCTCTACG
GGCCAGTCCGCGGTGTGTCAATTGTCAGTTCCACGAGACTGGAGGAGTCAGAAGGCACCCAGCCTCCTTC
CCCCAGTTCAGACACCGGCAGTGAGGGCGAGGAGGATGACGAGGGCGAGGAGCATGGCCTGGGAGGCCAG
AATGAAGTGGGTATTATACCCACCACCCTCGAGTTCCTGGAGAACCATGGGAAGAATATCCTTTTGTCTA
ATGGGAACCGTACGGCCACACGGGTGGCCAGCTACAATCAGGGCATCGTTGTCATCAACCAACCTCTGGT
GCCCCAGCTGCTGGTGCAGGTGCGGATAGATTTCCTAAACCGACAGTGGACATCTTCCCTTGTCCTGGGA
GTCATCACCTGCGCGCCTGAGAGGCTCAACTTCCCTGCTTCTGCCTGTGCCCTCAAACGGGCAGCCTGGC
TGCTGCGGGGCCGTGGGGTCTTCCACAACGGTCTCAAGATCTGCGAGAAGTTTGGGCCCAATCTGGACAC
GTGCCCTGAAGGCACCATCCTGGGACTGCGGCTGGACAGCTCTGGGGGGCTGCATCTTCATGTTAATGGG
GTGGACCAGGGGGTAGCTGTGCCAGATGTGCCCCAGCCCTGCCATGCGCTTGTGGACCTCTATGGGCAGT
GTGAGCAGGTGACAATCGTGAACCCTGAGCCAGGGGCTGCCAGTGGGAAAAGTGCTGGAACCCAAGGGGA
CATGGAGAAAGCAGACATGGTGGACGGTATCAAAGAGAGTGTGTGCTGGGGTCCACCACCTGCCGCTAGT
CCTCTAAAGAGCTGCGAGTACCATGCCCTTTGCTCTCGCTTCCAAGAACTCCTGCTGCTTCCCGAAGATT
ATTTCATGCCTCCGCCAAAGCGAAGCCTGTGCTACTGTGAGTCTTGCCGGAAGCTGCGAGGAGACGAGGC
CCACAGGCGCAGAGGGGAGCCTCCCCGGGAATATGCACTGCCCTTTGGCTGGTGCAGGTTCAACCTCAGA
GTGAATCCCCGCCTGGAGGCTGGGACACTAACCAAGAAGTGGCACATGGCATATCACGGGAGCAATGTTG
CCGCTGTACGGAGAGTGCTGGACCGAGGGGAGCTGGGAGCAGGTACTGCCTCCATCCTGAGCTGCCGTCC
TTTGAAGGGAGAACCTGGGGTAGGGTTCGAGGAGCCTGGCGAGAACTGTGCACCTCCTCGGGAGGAGCAG
CCCCCTCCTGTGCTGCTTTCCCCCTCCCTTCAATATGCTGGGGCGGAGACCCTGGCCTCCAAAGTGCAAT
TCCGGGACCCCAAATCCCAGCGGACGCACCAGGCTCAGGTGGCGTTCCAGGTGTGTGTGCGCCCTGGCTC
CTACACCCCGGGACCCCCTTCCGCTGCCCTTGGAGAACCTCCTGACCCTCACTTCAGTCCAGCCGAACTT
GAGTGGGTCACTAAGGAGAAGGGGGCCACACTCCTCTGTGCCCTGCTGGTACGGGTGGAATGA

Translation (1560 aa):
MAAGSGGSGGSGGGPGPGPGGGGGPSGSGSGPGSNGGLGSGGELHPRTGRLVSLSACGRTARRQQPGQEF
NHGLVLSREPLRDGRVFTVRIDRKVNSWSGSIEIGVTALDPSVLDFPSSATGLKGGSWVVSGCSVLRDGR
SVLEEYGQDLDQLGEGDRVGVERTVAGELRLWVNGRDCGVAATGLPPRVWAVVDLYGKCTQITVLPPEPG
FSPPTPIPTPPLEPLAPTEDSALAEQGTSADEAFMVSPAQARPETFPNSLESHNDFANMELSEVVSNTIL
SAYNGGLLNVNLSSPPAGEGLGSSGAATSPILTSNDALLFHEKCGTLIKLSNNNKTAERRRPLDEFNNGV
VMTNRPLRDNEMFEIRIDKLVDKWSGSIEIGVTTHNPNSLEYPATMTNLQSGTIMMSGCGILTNGKGTRR
EYCEFSLDELQEGDHIGLTRKSNSALHFFINGIDQGVATPLTPPVVYGVVDLYGMAVKVTIVHNNNHSDR
LRRNNAILRALSPEGALRRAAPAAQAEPERLLFHPNCGQKAAITHEGRTALRPHATDDFNHGVVLSSRAL
RDGEVFQVRIDKMVDKWAGSIEIGVTTHNPAYLQLPSTMTNLRSGTWMMTGNGVMHNGTTILDEYGHNLD
RLKAGDTVGVVRREDGTLHFFVNGMTQGPAAWNVPPGVYAVVDLYGQAAQATIVDDVEVAPVPEPLPEGN
NQVSPSSPSSGAGGSDLRFHQLHGSNAVITNGGRTALRHNCRSEFNDAIVISNRALRDGELFEIVIQKMV
DRWSGSIEAGVTAIRPEDLEFPNTMTDIDYDTWMLSGTAIMQDGNTMRNNYGCDLDALGTGARIGMMRTA
KGDLHYFINGQDQGAACSGLPPEVYAVVDLYGQCVQVSITNATGPMDNSLATSNTATEKSFPLHSPVAGV
AHRFHSTCGKNVTLEEDGTRAVRAAGYAHGLVFSTKELRAEEVFEVKVEELDEKWAGSLRLGLTTLAPGE
MGPGAGGGGPGLPPSLPELRTKTTWMVSSCEVRRDGQLQRMNYGRNLERLGVGSRVGVRRGADDTMHILV
DGEDMGPAATGIAKNVWAVLDLYGPVRGVSIVSSTRLEESEGTQPPSPSSDTGSEGEEDDEGEEHGLGGQ
NEVGIIPTTLEFLENHGKNILLSNGNRTATRVASYNQGIVVINQPLVPQLLVQVRIDFLNRQWTSSLVLG
VITCAPERLNFPASACALKRAAWLLRGRGVFHNGLKICEKFGPNLDTCPEGTILGLRLDSSGGLHLHVNG
VDQGVAVPDVPQPCHALVDLYGQCEQVTIVNPEPGAASGKSAGTQGDMEKADMVDGIKESVCWGPPPAAS
PLKSCEYHALCSRFQELLLLPEDYFMPPPKRSLCYCESCRKLRGDEAHRRRGEPPREYALPFGWCRFNLR
VNPRLEAGTLTKKWHMAYHGSNVAAVRRVLDRGELGAGTASILSCRPLKGEPGVGFEEPGENCAPPREEQ
PPPVLLSPSLQYAGAETLASKVQFRDPKSQRTHQAQVAFQVCVRPGSYTPGPPSAALGEPPDPHFSPAEL
EWVTKEKGATLLCALLVRVE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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