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Report for CCDS32580.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32580.1 Public Homo sapiens 17 FLCN 24 110 108 CCDS HistoryNCBI Gene:201163Re-query CCDS DB by CCDS ID:32580.1Re-query CCDS DB by GeneID:201163See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32580.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389169.9 ENSP00000373821.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000389169.9Link to Ensembl Protein Viewer:ENSP00000373821.5Re-query CCDS DB by Nucleotide ID:ENST00000389169Re-query CCDS DB by Protein ID:ENSP00000373821
Original member Current member NCBI NM_144606.7 NP_653207.1 Accepted alive Link to Nucleotide Sequence:NM_144606.7Link to Protein Sequence:NP_653207.1Re-query CCDS DB by Nucleotide ID:NM_144606Re-query CCDS DB by Protein ID:NP_653207Link to BLAST:NP_653207.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653207.1 342 Q8NFG4-2 342 100% 0 0

Chromosomal Locations for CCDS 32580.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 17221379 17221628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17222501 17222661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17223922 17224143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17226176 17226322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 17227889 17228137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1029 nt):
ATGAATGCCATCGTGGCTCTCTGCCACTTCTGCGAGCTCCACGGCCCCCGCACTCTCTTCTGCACGGAGG
TGCTGCACGCCCCACTTCCTCAAGGGGATGGGAATGAGGACAGTCCTGGCCAGGGTGAGCAGGCGGAAGA
AGAGGAAGGTGGCATTCAGATGAACAGTCGGATGCGTGCGCACAGCCCCGCAGAGGGGGCCAGCGTCGAG
TCCAGCAGCCCGGGGCCCAAAAAGTCGGACATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCACCCGG
GATATATCAGCCATGATAAAGAGACCTCCATTAAATACGTCAGCCACCAGCACCCCAGCCACCCCCAGCT
CTTCAGCATTGTCCGCCAGGCCTGTGTCCGGAGCCTGAGCTGTGAGGTCTGCCCTGGCCGTGAAGGCCCC
ATCTTCTTCGGAGATGAGCAGCACGGCTTTGTGTTCAGCCACACCTTCTTCATCAAGGACAGCCTGGCCA
GGGGCTTCCAGCGCTGGTACAGCATCATCACCATCATGATGGACCGGATCTACCTCATCAACTCCTGGCC
CTTCCTGCTGGGGAAGGTCCGGGGAATCATCGATGAGCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCA
GAGCAGTTTGGATGCCCACAGCGTGCTCAGAGGATGAACACAGCCTTCACGCCATTCCTACACCAGAGGA
ACGGCAACGCCGCCCGCTCGCTGACATCGCTGACAAGTGATGACAACCTGTGGGCGTGCCTGCACACCTC
CTTTGCCTGGCTCCTGAAGGCGTGTGGCAGCCGGCTGACCGAGAAGCTCCTGGAAGGTGCTCCGACCGAG
GATACCTTGGTCCAGATGGAGAAGCTCGCTGGTGAGGCAGGGGTGCTGTTGCCGGGGCCTTGGCCCGGAT
GGCCGTGGGGCGGTACCAGCTGTCTGCTCTCCTGGCAGGAATCGCTGAGGGAGGGAAACGCGGCTCTGAA
TCAGCCCAGAACGAGCCTTCGGGAAGCTCACCCTCCGATCTCGGTGTGA

Translation (342 aa):
MNAIVALCHFCELHGPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVE
SSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSIVRQACVRSLSCEVCPGREGP
IFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRIYLINSWPFLLGKVRGIIDELQGKALKVFEA
EQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTSDDNLWACLHTSFAWLLKACGSRLTEKLLEGAPTE
DTLVQMEKLAGEAGVLLPGPWPGWPWGGTSCLLSWQESLREGNAALNQPRTSLREAHPPISV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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