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Report for CCDS74946.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74946.1 Public Homo sapiens 3 DCP1A 24 110 108 CCDS HistoryNCBI Gene:55802Re-query CCDS DB by CCDS ID:74946.1Re-query CCDS DB by GeneID:55802See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74946.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000294241.10 ENSP00000476046.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000294241.10Link to Ensembl Protein Viewer:ENSP00000476046.2Re-query CCDS DB by Nucleotide ID:ENST00000294241Re-query CCDS DB by Protein ID:ENSP00000476046
Original member Current member NCBI NM_001290204.2 NP_001277133.1 Accepted alive Link to Nucleotide Sequence:NM_001290204.2Link to Protein Sequence:NP_001277133.1Re-query CCDS DB by Nucleotide ID:NM_001290204Re-query CCDS DB by Protein ID:NP_001277133Link to BLAST:NP_001277133.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277133.1 544 Q9NPI6-2 544 100% 0 0

Chromosomal Locations for CCDS 74946.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 53287580 53287660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53288065 53288283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53290791 53290856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53292069 53292827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53312241 53312379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53319407 53319473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53342144 53342271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53344902 53344942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 53347383 53347517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGGAGGCGCTGAGTCGAGCTGGGCAGGAGATGAGCCTAGCGGCCCTGAAGCAACACGACCCCTATATCA
CC
AGCATCGCAGACCTCACGGGCCAGGTCGCTCTGTACACCTTCTGCCCCAAGGCCAACCAGTGGGAGAA
G
ACTGATATAGAAGGGACCTTATTCGTATATCGAAGGTCAGCTTCCCCTTACCATGGTTTTACCATTGTG
AAT
CGACTAAATATGCACAATCTAGTTGAACCAGTGAATAAAGATTTGGAATTTCAGCTCCATGAACCAT
TT
CTTCTGTATAGAAATGCAAGCTTGTCGATATATAGTATCTGGTTTTATGACAAGAATGACTGTCACCG
C
ATAGCAAAACTCATGGCTGATGTGGTAGAAGAGGAGACACGGCGATCCCAGCAAGCTGCTCGGGACAAA
CAG
AGTCCCAGCCAGGCCAATGGCTGCAGCGACCACAGGCCCATCGACATCCTGGAGATGCTGAGCAGAG
CC
AAGGATGAGTATGAGAGGTCTGCTCCATCTGGACACAAGCATCTGACGGTAGAAGAGTTATTTGGAAC
C
TCTTTGCCAAAGGAACAACCAGCAGTTGTGGGTCTGGATTCAGAAGAAATGGAGAGGTTGCCAGGAGAT
GCC
TCCCAGAAAGAGCCCAATTCATTCCTACCATTTCCCTTTGAGCAGTTAGGAGGAGCCCCTCAATCAG
AA
ACCCTGGGTGTCCCTTCTGCTGCCCACCATTCAGTCCAGCCTGAAATCACCACCCCGGTGCTAATCAC
T
CCAGCCTCCATCACACAGTCCAATGAAAAGCATGCTCCAACCTACACAATCCCGTTGAGCCCTGTTCTC
AGT
CCCACTCTGCCAGCTGAAGCTCCTACTGCACAGGTTCCCCCCAGCTTACCTCGAAACAGCACCATGA
TG
CAGGCAGTGAAGACCACGCCTAGACAGAGGTCTCCACTCCTGAACCAGCCAGTCCCTGAGCTAAGCCA
T
GCCAGTCTGATTGCCAACCAGAGCCCCTTCAGGGCCCCATTGAACGTGACGAACACAGCTGGCACATCC
CTC
CCAAGCGTTGATCTTCTCCAGAAACTCAGGTTGACCCCACAGCATGACCAAATACAGACACAACCAC
TT
GGGAAAGGTGCAATGGTAGCCAGCTTTTCTCCGGCAGCTGGTCAGCTAGCCACACCTGAGAGCTTCAT
A
GAGCCTCCCTCTAAGACAGCAGCAGCAAGAGTGGCGGCCTCAGCCTCCCTGAGCAACATGGTGCTTGCT
CCC
CTTCAGTCTATGCAGCAGAACCAGGATCCTGAAGTATTTGTGCAGCCTAAGGTGTTATCCAGTGCCA
TC
CCGGTTGCAGGCGCCCCACTGGTTACTGCAACGACCACTGCAGTGTCTTCAGTCCTGCTGGCCCCAAG
T
GTTTTCCAGCAGACAGTTACAAGATCTTCGGACCTTGAGAGGAAAGCCAGCTCCCCTTCTCCTCTAACT
ATT
GGAACGCCAGAAAGTCAGAGAAAGCCTTCCATTATTCTCAGCAAGTCTCAGCTCCAGGATACATTAA
TA
CATCTAATAAAGAATGATTCCAGCTTCCTCAGTACACTTCATGAAGTCTACTTGCAGGTTCTGACCAA
G
AACAAAGACAACCACAACCTATGA


Translation (544 aa):
MEALSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRSASPYHGFTIV
N
RLNMHNLVEPVNKDLEFQLHEPFLLYRNAS
LSIYSIWFYDKNDCHRIAKLMADVVEEETRRSQQAARDK
Q
SPSQANGCSDHRPIDILEMLSRAKDEYER
SAPSGHKHLTVEELFGTSLPKEQPAVVGLDSEEMERLPGD
A
SQKEPNSFLPFPFEQLGGAPQSETLGVPSAAHHSVQPEITTPVLITPASITQSNEKHAPTYTIPLSPVL
S
PTLPAEAPTAQVPPSLPRNSTMMQAVKTTPRQRSPLLNQPVPELSHASLIANQSPFRAPLNVTNTAGTS
L
PSVDLLQKLRLTPQHDQIQTQPLGKGAMVASFSPAAGQLATPESFIEPPSKTAAARVAASASLSNMVLA
P
LQ
SMQQNQDPEVFVQPKVLSSAIPVAGAPLVTATTTAVSSVLLAPSVFQQTVTRSSDLERKASSPSPLT
I
GTPESQRKPSIILSKSQLQDTLIHLIK
NDSSFLSTLHEVYLQVLTKNKDNHNL



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 Genome Browser Links:   Ensembl Genome Browser
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