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Report for CCDS31841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31841.1 Public Homo sapiens 12 NEMP1 24 110 108 CCDS HistoryNCBI Gene:23306Re-query CCDS DB by CCDS ID:31841.1Re-query CCDS DB by GeneID:23306See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31841.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379391.7 ENSP00000368701.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000379391.7Link to Ensembl Protein Viewer:ENSP00000368701.3Re-query CCDS DB by Nucleotide ID:ENST00000379391Re-query CCDS DB by Protein ID:ENSP00000368701
Original member Current member NCBI NM_015257.3 NP_056072.2 Accepted alive Link to Nucleotide Sequence:NM_015257.3Link to Protein Sequence:NP_056072.2Re-query CCDS DB by Nucleotide ID:NM_015257Re-query CCDS DB by Protein ID:NP_056072Link to BLAST:NP_056072.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056072.2 371 O14524-2 371 100% 0 0

Chromosomal Locations for CCDS 31841.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 57059879 57060059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57060772 57060945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57063119 57063344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57064071 57064185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57064646 57064739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57070820 57070893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57072788 57072912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 57078619 57078745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1116 nt):
ATGGCGGGAGGAATGAAAGTGGCGGTCTCGCCGGCAGTTGGTCCCGGGCCCTGGGGCTCGGGAGTCGGGG
GCGGTGGGACAGTGCGGCTACTCTTGATCCTCTCCGGCTGCTTGGTCTACGGCACAGCTGAAACTGATGT
AAATGTGGTCATGCTTCAGGAATCCCAAGTTTGTGAAAAGCGTGCCAGCCAACAATTCTGTTACACAAAT
GTGCTTATCCCAAAATGGCATGATATATGGACACGGATACAGATCCGAGTAAATAGTTCCAGATTGGTTC
GAGTCACCCAGGTGGAGAATGAGGAGAAACTGAAGGAGCTAGAGCAAAGTCAAATTTTCTACTACTCTAC
TGGGATGACTGTGGGAATTGTGGCCTCTCTGCTAATCATCATTTTTATACTATCTAAGTTTATGCCTAAG
AAAAGTCCCATTTACGTCATCCTGGTGGGAGGCTGGTCTTTTTCTCTGTACCTCATTCAACTAGTTTTTA
AAAATTTACAAGAGATCTGGAGGTGTTACTGGCAGTATCTTTTAAGTTATGTCCTCACAGTTGGATTCAT
GAGTTTTGCAGTATGTTACAAGTATGGGCCCTTGGAGAATGAACGAAGTATCAACCTGCTGACCTGGACC
TTGCAGCTGATGGGCCTGTGTTTCATGTATTCTGGCATCCAGATACCACATATTGCCCTTGCCATTATCA
TCATTGCTCTTTGTACTAAGAACCTGGAACACCCTATTCAGTGGCTGTACATCACCTGCAGAAAGGTGTG
TAAGGGAGCAGAAAAGCCTGTTCCCCCTCGTCTCCTGACAGAAGAAGAATATCGGATACAAGGAGAGGTA
GAAACCCGAAAGGCTTTAGAGGAGCTCCGAGAATTTTGTAACAGTCCAGACTGCTCTGCTTGGAAGACTG
TTTCTCGAATCCAGTCTCCAAAAAGATTTGCTGACTTTGTGGAAGGCTCTTCCCACCTCACGCCAAATGA
AGTTTCTGTCCATGAGCAGGAGTATGGATTAGGGAGCATTATTGCCCAGGATGAAATCTATGAGGAAGCA
TCCTCTGAGGAGGAGGACTCATATTCTCGGTGTCCTGCTATCACACAGAACAACTTTCTAACCTAG

Translation (371 aa):
MAGGMKVAVSPAVGPGPWGSGVGGGGTVRLLLILSGCLVYGTAETDVNVVMLQESQVCEKRASQQFCYTN
VLIPKWHDIWTRIQIRVNSSRLVRVTQVENEEKLKELEQSQIFYYSTGMTVGIVASLLIIIFILSKFMPK
KSPIYVILVGGWSFSLYLIQLVFKNLQEIWRCYWQYLLSYVLTVGFMSFAVCYKYGPLENERSINLLTWT
LQLMGLCFMYSGIQIPHIALAIIIIALCTKNLEHPIQWLYITCRKVCKGAEKPVPPRLLTEEEYRIQGEV
ETRKALEELREFCNSPDCSAWKTVSRIQSPKRFADFVEGSSHLTPNEVSVHEQEYGLGSIIAQDEIYEEA
SSEEEDSYSRCPAITQNNFLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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