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Report for CCDS14362.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14362.1 Public Homo sapiens X MAGED2 24 110 108 CCDS HistoryNCBI Gene:10916Re-query CCDS DB by CCDS ID:14362.1Re-query CCDS DB by GeneID:10916See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14362.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000218439.8 ENSP00000218439.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000218439.8Link to Ensembl Protein Viewer:ENSP00000218439.4Re-query CCDS DB by Nucleotide ID:ENST00000218439Re-query CCDS DB by Protein ID:ENSP00000218439
Original member Current member EBI ENST00000375053.6 ENSP00000364193.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375053.6Link to Ensembl Protein Viewer:ENSP00000364193.2Re-query CCDS DB by Nucleotide ID:ENST00000375053Re-query CCDS DB by Protein ID:ENSP00000364193
Original member Current member EBI ENST00000375058.5 ENSP00000364198.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375058.5Link to Ensembl Protein Viewer:ENSP00000364198.1Re-query CCDS DB by Nucleotide ID:ENST00000375058Re-query CCDS DB by Protein ID:ENSP00000364198
Original member Current member EBI ENST00000375068.6 ENSP00000364209.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375068.6Link to Ensembl Protein Viewer:ENSP00000364209.1Re-query CCDS DB by Nucleotide ID:ENST00000375068Re-query CCDS DB by Protein ID:ENSP00000364209
Original member Current member EBI ENST00000396224.1 ENSP00000379526.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000396224.1Link to Ensembl Protein Viewer:ENSP00000379526.1Re-query CCDS DB by Nucleotide ID:ENST00000396224Re-query CCDS DB by Protein ID:ENSP00000379526
Original member Current member NCBI NM_014599.6 NP_055414.2 Accepted alive Link to Nucleotide Sequence:NM_014599.6Link to Protein Sequence:NP_055414.2Re-query CCDS DB by Nucleotide ID:NM_014599Re-query CCDS DB by Protein ID:NP_055414Link to BLAST:NP_055414.2
Original member Current member NCBI NM_177433.3 NP_803182.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_177433.3Link to Protein Sequence:NP_803182.1Re-query CCDS DB by Nucleotide ID:NM_177433Re-query CCDS DB by Protein ID:NP_803182Link to BLAST:NP_803182.1
Original member Current member NCBI NM_201222.3 NP_957516.1 Accepted alive Link to Nucleotide Sequence:NM_201222.3Link to Protein Sequence:NP_957516.1Re-query CCDS DB by Nucleotide ID:NM_201222Re-query CCDS DB by Protein ID:NP_957516Link to BLAST:NP_957516.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055414.2 606 Q9UNF1-1 606 100% 0 0
NP_803182.1 606 Q9UNF1-1 606 100% 0 0
NP_957516.1 606 Q9UNF1-1 606 100% 0 0

Chromosomal Locations for CCDS 14362.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 54809332 54809376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 54809722 54810213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 54810821 54811129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 54811250 54811313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 54811574 54811653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 54812157 54812251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 54812945 54813024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 54813118 54813160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 54813488 54813550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 54814661 54814775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 54815248 54815682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1821 nt):
ATGTCTGACACAAGCGAGAGTGGTGCAGGTCTAACTCGCTTCCAGGCTGAAGCTTCAGAAAAGGACAGTA
GCTCGATGATGCAGACTCTGTTGACAGTGACCCAGAATGTGGAGGTCCCAGAGACACCGAAGGCCTCAAA
GGCACTGGAGGTCTCAGAGGATGTGAAGGTCTCAAAAGCCTCTGGGGTCTCAAAGGCCACAGAGGTCTCA
AAGACCCCAGAGGCTCGGGAGGCACCTGCCACCCAGGCCTCATCTACTACTCAGCTGACTGATACCCAGG
TTCTGGCAGCTGAAAACAAGAGTCTAGCAGCTGACACCAAGAAACAGAATGCTGACCCGCAGGCTGTGAC
AATGCCTGCCACTGAGACCAAAAAGGTCAGCCATGTGGCTGATACAAAGGTCAATACAAAGGCTCAGGAG
ACTGAGGCTGCACCCTCTCAGGCCCCAGCAGATGAACCTGAGCCTGAGAGTGCAGCTGCCCAGTCTCAGG
AGAATCAGGATACTCGGCCCAAGGTCAAAGCCAAGAAAGCCCGAAAGGTGAAGCATCTGGATGGGGAAGA
GGATGGCAGCAGTGATCAGAGTCAGGCTTCTGGAACCACAGGTGGCCGAAGGGTCTCAAAGGCCCTAATG
GCCTCAATGGCCCGCAGGGCTTCAAGGGGTCCCATAGCCTTTTGGGCCCGCAGGGCATCAAGGACTCGGT
TGGCTGCTTGGGCCCGGAGAGCCTTGCTCTCCCTGAGATCACCTAAAGCCCGTAGGGGCAAGGCTCGCCG
TAGAGCTGCCAAGCTCCAGTCATCCCAAGAGCCTGAAGCACCACCACCTCGGGATGTGGCCCTTTTGCAA
GGGAGGGCAAATGATTTGGTGAAGTACCTTTTGGCTAAAGACCAGACGAAGATTCCCATCAAGCGCTCGG
ACATGCTGAAGGACATCATCAAAGAATACACTGATGTGTACCCCGAAATCATTGAACGAGCAGGCTATTC
CTTGGAGAAGGTATTTGGGATTCAATTGAAGGAAATTGATAAGAATGACCACTTGTACATTCTTCTCAGC
ACCTTAGAGCCCACTGATGCAGGCATACTGGGAACGACTAAGGACTCACCCAAGCTGGGTCTGCTCATGG
TGCTTCTTAGCATCATCTTCATGAATGGAAATCGGTCCAGTGAGGCTGTCATCTGGGAGGTGCTGCGCAA
GTTGGGGCTGCGCCCTGGGATACATCATTCACTCTTTGGGGACGTGAAGAAGCTCATCACTGATGAGTTT
GTGAAGCAGAAGTACCTGGACTATGCCAGAGTCCCCAATAGCAATCCCCCTGAATATGAGTTCTTCTGGG
GCCTGCGCTCTTACTATGAGACCAGCAAGATGAAAGTCCTCAAGTTTGCCTGCAAGGTACAAAAGAAGGA
TCCCAAGGAATGGGCAGCTCAGTACCGAGAGGCGATGGAAGCGGATTTGAAGGCTGCAGCTGAGGCTGCA
GCTGAAGCCAAGGCTAGGGCCGAGATTAGAGCTCGAATGGGCATTGGGCTCGGCTCGGAGAATGCTGCCG
GGCCCTGCAACTGGGACGAAGCTGATATCGGACCCTGGGCCAAAGCCCGGATCCAGGCGGGAGCAGAAGC
TAAAGCCAAAGCCCAAGAGAGTGGCAGTGCCAGCACTGGTGCCAGTACCAGTACCAATAACAGTGCCAGT
GCCAGTGCCAGCACCAGTGGTGGCTTCAGTGCTGGTGCCAGCCTGACCGCCACTCTCACATTTGGGCTCT
TCGCTGGCCTTGGTGGAGCTGGTGCCAGCACCAGTGGCAGCTCTGGTGCCTGTGGTTTCTCCTACAAGTG
A

Translation (606 aa):
MSDTSESGAGLTRFQAEASEKDSSSMMQTLLTVTQNVEVPETPKASKALEVSEDVKVSKASGVSKATEVS
KTPEAREAPATQASSTTQLTDTQVLAAENKSLAADTKKQNADPQAVTMPATETKKVSHVADTKVNTKAQE
TEAAPSQAPADEPEPESAAAQSQENQDTRPKVKAKKARKVKHLDGEEDGSSDQSQASGTTGGRRVSKALM
ASMARRASRGPIAFWARRASRTRLAAWARRALLSLRSPKARRGKARRRAAKLQSSQEPEAPPPRDVALLQ
GRANDLVKYLLAKDQTKIPIKRSDMLKDIIKEYTDVYPEIIERAGYSLEKVFGIQLKEIDKNDHLYILLS
TLEPTDAGILGTTKDSPKLGLLMVLLSIIFMNGNRSSEAVIWEVLRKLGLRPGIHHSLFGDVKKLITDEF
VKQKYLDYARVPNSNPPEYEFFWGLRSYYETSKMKVLKFACKVQKKDPKEWAAQYREAMEADLKAAAEAA
AEAKARAEIRARMGIGLGSENAAGPCNWDEADIGPWAKARIQAGAEAKAKAQESGSASTGASTSTNNSAS
ASASTSGGFSAGASLTATLTFGLFAGLGGAGASTSGSSGACGFSYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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