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Report for CCDS58659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58659.1 Public Homo sapiens 19 ZNF382 24 110 108 CCDS HistoryNCBI Gene:84911Re-query CCDS DB by CCDS ID:58659.1Re-query CCDS DB by GeneID:84911See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58659.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000439428.5 ENSP00000407593.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000439428.5Link to Ensembl Protein Viewer:ENSP00000407593.1Re-query CCDS DB by Nucleotide ID:ENST00000439428Re-query CCDS DB by Protein ID:ENSP00000407593
Original member Current member NCBI NM_001256838.2 NP_001243767.1 Accepted alive Link to Nucleotide Sequence:NM_001256838.2Link to Protein Sequence:NP_001243767.1Re-query CCDS DB by Nucleotide ID:NM_001256838Re-query CCDS DB by Protein ID:NP_001243767Link to BLAST:NP_001243767.1
Original member Current member NCBI NM_001398492.1 NP_001385421.1 Accepted alive Link to Nucleotide Sequence:NM_001398492.1Link to Protein Sequence:NP_001385421.1Re-query CCDS DB by Nucleotide ID:NM_001398492Re-query CCDS DB by Protein ID:NP_001385421Link to BLAST:NP_001385421.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243767.1 549 Q96SR6-2 549 100% 0 0
NP_001385421.1 549 Q96SR6-2 549 100% 0 0

Chromosomal Locations for CCDS 58659.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 36607614 36607622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36609927 36610053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36610650 36610742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 36626130 36627550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1650 nt):
ATGTCTCAGGGATCAGTGTCATTCAAGGATGTGACTGTGGACTTCACCCAGGAGGAGTGGCAGCAACTAG
ACCCTGCTCAGAAGGCGCTTTACAGGGATGTGATGTTGGAAAACTATTGCCACTTCGTATCTGTGGGGTT
TCACATGGCTAAGCCTGATATGATCCGCAAGTTGGAACAAGGAGAAGAGCTATGGACACAGAGAATTTTT
CCAAGTTACAGCTACCTAGAAGAAGATGGGAAAACTGAAGATGTCTTAGTGAAGTTCAAAGAATACCAAG
ACAGGCATTCTAGACCCCTCATATTCATCAACCACAAAAAACTAATTAAGGAGAGAAGTAATATTTATGG
TAAAACATTTACTCTAGGCAAGAACCGTATTTCAAAAACAATACTATGTGAATATAAACCTGATGGAAAA
GTTTTGAAAAATATTTCAGAACTAGTCATTAGAAATATAAGCCCCATAAAAGAGAAGTTTGGTGACAGTA
CTGGATGGGAGAAATCACTCCTCAATACCAAGCATGAGAAAATTCATCCTGCAGTGAATCTCCATAAACA
AACAGAAAGAGTTCTCAGTGGTAAACAGGAGCTTATTCAGCATCAGAAGGTTCAAGCTCCAGAGCAACCA
TTTGACCATAATGAATGTGAAAAATCCTTCCTGATGAAAGGAATGCTATTTACACATACTAGAGCTCACA
GAGGAGAAAGAACCTTTGAATACAATAAAGATGGAATTGCCTTCATAGAAAAGTCAAGCCTCAGTGTCCA
TCCAAGTAATCTTATGGAAAAGAAGCCCTCTGCCTACAACAAATATGGGAAATTCCTCTGCAGAAAGCCT
GTTTTTATTATGCCTCAGAGACCTCAAACAGAAGAGAAACCCTTTCACTGTCCTTACTGTGGGAATAACT
TTAGAAGGAAGTCATACCTCATTGAACATCAGCGAATTCACACAGGTGAAAAACCTTATGTTTGCAATCA
ATGTGGAAAGGCCTTCCGTCAGAAGACAGCCCTCACCCTTCATGAGAAAACACATATAGAGGGGAAACCC
TTTATTTGTATCGATTGTGGGAAGTCCTTCCGCCAGAAGGCCACCCTCACTAGACATCACAAAACACATA
CGGGGGAGAAAGCCTATGAATGTCCTCAGTGTGGAAGTGCCTTTAGGAAGAAGTCATACCTCATTGATCA
CCAGAGAACTCACACAGGAGAGAAACCGTATCAGTGTAATGAGTGTGGGAAGGCATTTATCCAGAAGACA
ACCCTCACTGTTCATCAGAGAACTCACACAGGAGAGAAACCCTATATTTGCAATGAATGTGGGAAGTCCT
TCTGCCAAAAGACAACCCTCACTCTCCACCAGAGAATTCACACGGGGGAAAAACCCTATATTTGTAATGA
ATGTGGGAAGTCCTTCCGCCAGAAGGCAATCCTCACTGTTCATCACAGAATACATACAGGAGAAAAATCC
AATGGGTGTCCTCAGTGTGGGAAAGCCTTCAGTAGGAAATCAAACCTCATTCGCCATCAGAAAACTCACA
CAGGCGAGAAACCATATGAATGTAAACAGTGTGGGAAGTTCTTCAGTTGTAAGTCAAACCTCATTGTCCA
TCAGAAAACTCACAAGGTAGAAACCACGGGAATTCAGTAA

Translation (549 aa):
MSQGSVSFKDVTVDFTQEEWQQLDPAQKALYRDVMLENYCHFVSVGFHMAKPDMIRKLEQGEELWTQRIF
PSYSYLEEDGKTEDVLVKFKEYQDRHSRPLIFINHKKLIKERSNIYGKTFTLGKNRISKTILCEYKPDGK
VLKNISELVIRNISPIKEKFGDSTGWEKSLLNTKHEKIHPAVNLHKQTERVLSGKQELIQHQKVQAPEQP
FDHNECEKSFLMKGMLFTHTRAHRGERTFEYNKDGIAFIEKSSLSVHPSNLMEKKPSAYNKYGKFLCRKP
VFIMPQRPQTEEKPFHCPYCGNNFRRKSYLIEHQRIHTGEKPYVCNQCGKAFRQKTALTLHEKTHIEGKP
FICIDCGKSFRQKATLTRHHKTHTGEKAYECPQCGSAFRKKSYLIDHQRTHTGEKPYQCNECGKAFIQKT
TLTVHQRTHTGEKPYICNECGKSFCQKTTLTLHQRIHTGEKPYICNECGKSFRQKAILTVHHRIHTGEKS
NGCPQCGKAFSRKSNLIRHQKTHTGEKPYECKQCGKFFSCKSNLIVHQKTHKVETTGIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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