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Report for CCDS60552.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60552.1 Public Homo sapiens 10 NUDT13 24 110 108 CCDS HistoryNCBI Gene:25961Re-query CCDS DB by CCDS ID:60552.1Re-query CCDS DB by GeneID:25961See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60552.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000349051.9 ENSP00000335326.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000349051.9Link to Ensembl Protein Viewer:ENSP00000335326.6Re-query CCDS DB by Nucleotide ID:ENST00000349051Re-query CCDS DB by Protein ID:ENSP00000335326
Original member Current member NCBI NM_001283014.2 NP_001269943.1 Accepted alive Link to Nucleotide Sequence:NM_001283014.2Link to Protein Sequence:NP_001269943.1Re-query CCDS DB by Nucleotide ID:NM_001283014Re-query CCDS DB by Protein ID:NP_001269943Link to BLAST:NP_001269943.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269943.1 263 Q86X67-2 263 100% 0 0

Chromosomal Locations for CCDS 60552.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 73114366 73114448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73120018 73120157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73122175 73122309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73124214 73124320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73125118 73125243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73130703 73130903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGTCCCTGTATTGTGGAATAGCTTGCAGGAGAAAATTTTTTTGGTGCTATAGGCTGCTGTCAACCTATG
TTACTAAGACACGGTATTTATTTGAACTGAAGGAAGATGATGATGCATGTAAAAAAGCCCAGCAAACAGG
AGCGTTTTACCTCTTTCATAGTCTGGCTCCTCTGCTTCAGACTTCAGCACATCAATACCTGGCCCCCCGG
CACAGCCTGTTAGAGTTGGAAAGGCTCCTGGGTAAATTTGGACAGGATGCACAAAGAATAGAAGATTCTG
TGCTGATTGGATGCTCTGAGCAGCAGGAAGCATGGTTTGCTCTGGATCTAGGTCTGGATAGCTCCTTTTC
CATAAGTGCCTCCTTACACAAACCTGAAATGGAGACAGAGCTCAAGGGGTCTTTCATTGAGCTGAGAAAG
GCACTCTTTCAACTCAATGCAAGGGATGCCTCCTTGCTGTCCACGGCTCAAGCTCTTCTCCGCTGGCATG
ATGCTCATCAGTTCTGCAGCAGAAGTGGGCAGCCCACCAAGAAGAACGTGGCTGGCAGCAAGCGTGTGTG
CCCTTCCAATAATATAATCTATTATCCACAGATCCAGGTGAACTTGAGAGAATTAGAGACAGCTGCCTGG
TTCAGTCATGATGAGGTAGCCACAGCCCTGAAGAGAAAGGGCCCCTATACTCAGCAACAGAATGGGACTT
TCCCATTCTGGCTGCCCCCTAAGTTAGCCATCTCCCACCAACTGATTAAGGAGTGGGTGGAAAAACAGAC
CTGTTCTTCCCTGCCTGCTTAG

Translation (263 aa):
MSLYCGIACRRKFFWCYRLLSTYVTKTRYLFELKEDDDACKKAQQTGAFYLFHSLAPLLQTSAHQYLAPR
HSLLELERLLGKFGQDAQRIEDSVLIGCSEQQEAWFALDLGLDSSFSISASLHKPEMETELKGSFIELRK
ALFQLNARDASLLSTAQALLRWHDAHQFCSRSGQPTKKNVAGSKRVCPSNNIIYYPQIQVNLRELETAAW
FSHDEVATALKRKGPYTQQQNGTFPFWLPPKLAISHQLIKEWVEKQTCSSLPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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