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Report for CCDS42236.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42236.1 Public Homo sapiens 17 ANKFY1 24 110 108 CCDS HistoryNCBI Gene:51479Re-query CCDS DB by CCDS ID:42236.1Re-query CCDS DB by GeneID:51479See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42236.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000574367.5 ENSP00000459775.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000574367.5Link to Ensembl Protein Viewer:ENSP00000459775.1Re-query CCDS DB by Nucleotide ID:ENST00000574367Re-query CCDS DB by Protein ID:ENSP00000459775
Original member Current member NCBI NM_016376.5 NP_057460.3 Accepted alive Link to Nucleotide Sequence:NM_016376.5Link to Protein Sequence:NP_057460.3Re-query CCDS DB by Nucleotide ID:NM_016376Re-query CCDS DB by Protein ID:NP_057460Link to BLAST:NP_057460.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057460.3 1170 Q9P2R3-2 1170 100% 0 0

Chromosomal Locations for CCDS 42236.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4167779 4167911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4169198 4169288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4170715 4170861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4172556 4172680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4173354 4173444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4173909 4174056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4177126 4177302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4178857 4179057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4179721 4179877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4181254 4181372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4182181 4182352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4183398 4183551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4183812 4183910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4184818 4185046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4189382 4189479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4194978 4195177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4195403 4195471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4197373 4197577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4206321 4206486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4207933 4208082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4209824 4209947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4216983 4217118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4235772 4235890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4242256 4242448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4263932 4263941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3513 nt):
ATGGCGGAAGAGGAGGTGGCCAAGTTGGAGAAGCACTTGATGCTTCTGCGGCAGGAGTATGTCAAGCTGC
AGAAGAAGCTGGCGGAGACAGAGAAGCGCTGCGCTCTCTTGGCTGCGCAGGCAAACAAGGAGAGCAGCAG
CGAGTCCTTCATCAGCCGTCTGCTGGCCATCGTGGCAGACCTCTACGAGCAGGAGCAGTACAGCGATCTG
AAGATAAAGGTTGGGGACAGGCACATCAGTGCTCACAAGTTTGTCCTGGCAGCCCGCAGTGACAGCTGGA
GTCTGGCTAACTTGTCTTCCACTAAAGAGTTGGACCTGTCAGATGCTAATCCTGAGGTGACGATGACAAT
GCTTCGCTGGATCTATACAGATGAGCTGGAGTTCAGAGAGGATGATGTGTTCCTGACTGAACTGATGAAA
CTAGCAAATCGGTTTCAGCTACAGCTCCTCAGGGAGAGATGTGAGAAGGGTGTTATGTCTCTAGTGAATG
TCAGGAACTGTATTCGCTTCTACCAGACGGCAGAGGAGCTGAATGCCAGCACACTGATGAACTACTGTGC
AGAAATTATTGCAAGTCATTGGGACGACCTGAGGAAGGAGGATTTCAGCAGCATGAGCGCTCAGTTGTTA
TACAAAATGATCAAATCCAAGACAGAGTACCCGCTACATAAAGCCATCAAAGTGGAGAGAGAAGACGTGG
TCTTCCTGTATCTGATTGAAATGGATTCCCAGCTCCCTGGGAAGCTGAATGAAGCGGATCATAACGGAGA
TCTGGCATTAGATCTAGCCCTCTCACGACGACTGGAGAGTATTGCCACCACGCTGGTTAGTCACAAAGCT
GATGTGGACATGGTGGACAAGAGTGGCTGGAGCTTGTTACACAAAGGAATCCAAAGAGGAGATCTCTTTG
CTGCCACTTTCCTCATTAAGAATGGGGCCTTTGTCAACGCTGCTACACTGGGTGCCCAGGAGACACCACT
GCACCTTGTGGCCTTGTACAGTTCAAAGAAACACTCAGCAGATGTGATGTCTGAGATGGCGCAGATTGCA
GAGGCCCTTCTGCAGGCTGGTGCCAACCCCAACATGCAGGACAGCAAGGGGAGGACTCCTTTACATGTGT
CCATCATGGCCGGGAATGAATATGTGTTCAGTCAGCTGCTGCAGTGCAAACAACTAGATTTAGAACTCAA
AGACCACGAGGGCAGCACGGCTCTGTGGCTGGCAGTGCAGCATATCACAGTGTCTTCTGACCAGTCTGTG
AACCCCTTCGAAGATGTCCCCGTGGTAAATGGGACTTCATTTGATGAGAACAGCTTTGCAGCCAGACTCA
TCCAGCGCGGCAGCCACACAGACGCACCTGACACGGCGACAGGAAACTGTTTACTACAGCGGGCAGCTGG
AGCAGGAAACGAGGCAGCAGCTCTTTTCCTGGCAACCAACGGTGCCCATGTCAACCACAGAAACAAGTGG
GGAGAAACCCCGTTGCACACAGCGTGTCGGCATGGCCTGGCCAACCTCACGGCAGAGCTCCTGCAGCAAG
GCGCCAACCCAAACCTGCAGACGGAGGAAGCTCTGCCTCTGCCAAAGGAGGCCGCATCCCTGACCAGCTT
GGCGGACAGCGTCCATCTGCAGACGCCACTGCACATGGCGATCGCCTATAACCATCCGGATGTGGTGTCT
GTCATCCTGGAGCAGAAAGCCAATGCTCTTCATGCCACCAACAACTTGCAGATCATTCCGGACTTCAGCC
TCAAAGATTCCCGAGACCAGACTGTGCTGGGCCTGGCATTATGGACTGGCATGCACACGATCGCAGCCCA
GCTGCTGGGCTCTGGAGCCGCCATCAATGACACCATGTCGGATGGGCAGACGCTACTGCACATGGCCATA
CAGCGGCAGGACAGCAAGAGCGCACTCTTCCTGCTGGAGCACCAGGCAGATATAAATGTCAGCAGGACTC
AGGACGGGGAGACAGCCCTCCAGCTGGCCATCAGAAACCAGCTTCCACTCGTAGTTGATGCCATATGCAC
CCGAGGAGCTGACATGTCTGTGCCAGATGAGAAGGGGAACCCCCCGCTGTGGCTTGCATTGGCAAACAAT
CTGGAGGACATCGCATCCACTCTGGTCAGACATGGCTGTGATGCCACATGCTGGGGTCCGGGACCTGGTG
GGTGCCTTCAGACGCTCCTGCACAGAGCCATTGATGAAAACAACGAGCCCACCGCCTGCTTTCTTATTCG
CAGTGGCTGTGACGTGAACAGTCCCAGACAACCAGGCGCCAATGGAGAAGGAGAGGAAGAGGCTAGAGAT
GGGCAGACCCCTTTGCATTTGGCAGCCTCTTGGGGGCTGGAAGAGACAGTACAGTGTCTTCTGGAGTTTG
GTGCCAACGTGAACGCACAGGATGCAGAAGGAAGAACCCCCATCCACGTGGCCATCAGCAGCCAACACGG
TGTCATCATTCAGCTGTTGGTTTCTCACCCCGATATCCATTTGAATGTACGAGACAGACAAGGGCTGACC
CCGTTTGCCTGTGCCATGACTTTCAAGAACAACAAGTCAGCCGAGGCCATTCTCAAACGAGAGTCCGGGG
CTGCTGAGCAGGTGGATAACAAGGGCCGGAATTTCCTTCATGTGGCAGTTCAGAACTCTGATATTGAAAG
TGTGCTGTTCCTGATCAGTGTCCACGCTAATGTGAATTCAAGAGTCCAGGATGCCTCCAAGTTGACCCCC
CTGCACCTCGCTGTCCAAGCAGGCTCAGAAATTATTGTCCGCAATTTGCTTCTTGCGGGAGCCAAAGTGA
ACGAATTAACCAAGCATCGCCAGACTGCCCTCCATCTTGCTGCCCAGCAGGACCTGCCCACCATCTGCTC
AGTCCTCCTAGAGAATGGCGTGGACTTTGCTGCCGTGGATGAGAATGGAAACAATGCTCTTCATCTTGCT
GTCATGCACGGCCGGCTCAACAACATCCGGGTTCTCCTGACAGAGTGCACAGTGGACGCCGAAGCCTTTA
ATCTCAGAGGCCAGTCACCACTGCACATTTTGGGACAATATGGCAAGGAGAATGCAGCGGCCATCTTTGA
TCTCTTCCTAGAATGCATGCCGGGGTATCCTCTGGACAAGCCGGATGCAGACGGCAGCACGGTGCTGCTC
CTGGCATACATGAAAGGGAACGCCAACTTGTGCCGCGCCATCGTCCGGTCGGGGGCTCGCCTCGGGGTGA
ATAACAACCAGGGAGTCAACATCTTCAACTACCAGGTCGCCACCAAGCAGCTCCTGTTCCGACTGCTGGA
TATGCTGTCCAAGGAGCCTCCGTGGTGTGACGGCTCCTACTGCTATGAGTGCACTGCCAGGTTCGGAGTC
ACCACTCGCAAACACCACTGTCGTCACTGCGGACGTCTTCTTTGCCATAAATGCTCGACCAAGGAGATTC
CTATTATAAAGTTTGATCTGAACAAGCCTGTGCGGGTTTGCAACATTTGTTTTGATGTACTGACTCTGGG
TGGGGTTTCTTAG

Translation (1170 aa):
MAEEEVAKLEKHLMLLRQEYVKLQKKLAETEKRCALLAAQANKESSSESFISRLLAIVADLYEQEQYSDL
KIKVGDRHISAHKFVLAARSDSWSLANLSSTKELDLSDANPEVTMTMLRWIYTDELEFREDDVFLTELMK
LANRFQLQLLRERCEKGVMSLVNVRNCIRFYQTAEELNASTLMNYCAEIIASHWDDLRKEDFSSMSAQLL
YKMIKSKTEYPLHKAIKVEREDVVFLYLIEMDSQLPGKLNEADHNGDLALDLALSRRLESIATTLVSHKA
DVDMVDKSGWSLLHKGIQRGDLFAATFLIKNGAFVNAATLGAQETPLHLVALYSSKKHSADVMSEMAQIA
EALLQAGANPNMQDSKGRTPLHVSIMAGNEYVFSQLLQCKQLDLELKDHEGSTALWLAVQHITVSSDQSV
NPFEDVPVVNGTSFDENSFAARLIQRGSHTDAPDTATGNCLLQRAAGAGNEAAALFLATNGAHVNHRNKW
GETPLHTACRHGLANLTAELLQQGANPNLQTEEALPLPKEAASLTSLADSVHLQTPLHMAIAYNHPDVVS
VILEQKANALHATNNLQIIPDFSLKDSRDQTVLGLALWTGMHTIAAQLLGSGAAINDTMSDGQTLLHMAI
QRQDSKSALFLLEHQADINVSRTQDGETALQLAIRNQLPLVVDAICTRGADMSVPDEKGNPPLWLALANN
LEDIASTLVRHGCDATCWGPGPGGCLQTLLHRAIDENNEPTACFLIRSGCDVNSPRQPGANGEGEEEARD
GQTPLHLAASWGLEETVQCLLEFGANVNAQDAEGRTPIHVAISSQHGVIIQLLVSHPDIHLNVRDRQGLT
PFACAMTFKNNKSAEAILKRESGAAEQVDNKGRNFLHVAVQNSDIESVLFLISVHANVNSRVQDASKLTP
LHLAVQAGSEIIVRNLLLAGAKVNELTKHRQTALHLAAQQDLPTICSVLLENGVDFAAVDENGNNALHLA
VMHGRLNNIRVLLTECTVDAEAFNLRGQSPLHILGQYGKENAAAIFDLFLECMPGYPLDKPDADGSTVLL
LAYMKGNANLCRAIVRSGARLGVNNNQGVNIFNYQVATKQLLFRLLDMLSKEPPWCDGSYCYECTARFGV
TTRKHHCRHCGRLLCHKCSTKEIPIIKFDLNKPVRVCNICFDVLTLGGVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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