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Report for CCDS94063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94063.1 Public Homo sapiens 7 SP4 24 110 108 CCDS HistoryNCBI Gene:6671Re-query CCDS DB by CCDS ID:94063.1Re-query CCDS DB by GeneID:6671See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 94063.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000649633.1 ENSP00000496957.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649633.1Link to Ensembl Protein Viewer:ENSP00000496957.1Re-query CCDS DB by Nucleotide ID:ENST00000649633Re-query CCDS DB by Protein ID:ENSP00000496957
Original member Current member NCBI NM_001326542.2 NP_001313471.1 Accepted alive Link to Nucleotide Sequence:NM_001326542.2Link to Protein Sequence:NP_001313471.1Re-query CCDS DB by Nucleotide ID:NM_001326542Re-query CCDS DB by Protein ID:NP_001313471Link to BLAST:NP_001313471.1

Chromosomal Locations for CCDS 94063.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 21428721 21428792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 21429289 21430843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 21477079 21477307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 21481924 21482123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 21511022 21511269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2304 nt):
ATGGCTACAGAAGGAGGGAAAACCTCTGAGCCAGAGAATAACAATAAAAAACCCAAAACCTCAGGCTCCC
AGGACTCTCAGCCCTCTCCTCTGGCTTTACTGGCAGCTACTTGCAGCAAAATAGGGACTCCTGGTGAAAA
TCAAGCAACTGGACAACAACAAATTATTATAGATCCAAGTCAAGGATTGGTGCAACTTCAAAATCAACCA
CAACAGCTAGAACTGGTAACAACGCAACTTGCTGGAAACGCTTGGCAACTTGTTGCCTCCACTCCTCCTG
CTTCAAAAGAGAATAACGTTTCTCAACCAGCCTCTAGTTCGTCTAGTTCTTCCAGCAGTAATAACGGGAG
TGCATCTCCTACAAAAACTAAATCAGGTAATTCTTCCACCCCTGGTCAATTTCAAGTCATACAAGTACAA
AATCCAAGTGGTAGTGTACAGTACCAAGTAATTCCACAACTTCAGACAGTGGAAGGTCAACAAATTCAAA
TCAATCCAACTAGTAGTTCATCTCTACAGGATTTGCAGGGTCAAATTCAGCTCATTTCTGCAGGTAATAA
TCAAGCTATACTCACAGCTGCTAACAGGACAGCTTCTGGGAATATTCTTGCTCAAAACCTGGCAAATCAG
ACAGTTCCGGTCCAAATTAGACCTGGTGTTTCAATACCACTGCAGTTACAGACTCTTCCTGGTACTCAGG
CTCAAGTTGTAACAACCCTACCAATTAACATTGGAGGAGTGACTCTAGCTTTGCCAGTGATAAACAACGT
GGCTGCCGGAGGAGGGACTGGGCAGGTTGGCCAGCCTGCTGCTACTGCTGATAGTGGGACTTCCAATGGG
AATCAATTAGTTTCCACACCCACCAACACCACTACTTCTGCCAGTACTATGCCAGAATCTCCCTCCTCCT
CCACTACCTGCACAACCACTGCTTCAACGTCTTTGACAAGCAGTGACACATTAGTGAGCTCAGCAGATAC
TGGCCAGTATGCAAGCACATCAGCCAGTAGTTCTGAACGCACCATTGAAGAATCTCAAACACCTGCTGCT
ACTGAGTCTGAAGCCCAGAGCTCCAGTCAGCTTCAGCCTAATGGAATGCAGAATGCACAGGATCAATCAA
ATTCTCTTCAGCAGGTGCAAATTGTAGGCCAACCTATCTTACAGCAGATCCAGATCCAACAGCCTCAGCA
ACAGATCATTCAGGCTATTCCACCACAGTCGTTTCAACTCCAGTCAGGGCAGACGATTCAGACCATCCAG
CAGCAGCCTTTACAGAATGTTCAACTTCAAGCAGTAAATCCGACTCAGGTGCTTATCAGGGCTCCAACTT
TAACACCTTCAGGGCAAATCAGTTGGCAAACTGTACAGGTTCAGAATATTCAGAGTCTTTCAAATTTGCA
AGTTCAGAATGCTGGGTTATCCCAACAATTAACCATCACCCCAGTGTCTTCAAGTGGTGGCACAACTCTT
GCTCAGATTGCTCCTGTGGCTGTTGCTGGTGCCCCAATAACTTTGAATACTGCCCAGCTTGCATCAGTGC
CTAACCTTCAGACAGTGAGCGTTGCCAACCTGGGTGCTGCAGGTGTTCAAGTGCAGGGAGTTCCCGTTAC
AATCACTAGTGTTGCAGGTCAGCAGCAAGGACAAGATGGAGTAAAAGTCCAGCAAGCTACTATAGCTCCT
GTAACTGTAGCAGTTGGAGGAATTGCTAATGCCACGATAGGTGCTGTTAGTCCTGACCAACTCACACAAG
TGCATTTGCAGCAAGGCCAGCAGACTTCTGATCAAGAGGTACAACCTGGCAAGAGGCTTCGAAGAGTTGC
CTGTTCCTGTCCTAATTGTAGGGAAGGAGAAGGAAGAGGCAGTAATGAACCAGGAAAAAAGAAGCAGCAT
ATCTGTCATATTGAAGGATGTGGTAAAGTTTATGGCAAAACATCTCATTTACGAGCACATCTTCGCTGGC
ATACTGGAGAAAGACCTTTTATATGCAACTGGATGTTTTGTGGCAAAAGATTCACACGGAGTGATGAGCT
CCAGAGACATAGAAGAACCCATACAGGTGAAAAGAGATTTGAATGCCCGGAATGTTCTAAAAGGTTTATG
CGGAGTGATCATCTCTCCAAACATGTCAAAACGCACCAGAATAAAAAAGGTGGTGGGACAGCTCTTGCCA
TTGTTACCTCGGGAGAACTGGACTCATCTGTTACAGAGGTGCTTGGCTCCCCAAGAATTGTCACAGTTGC
AGCCATTTCTCAAGATTCGAATCCAGCAACTCCCAATGTTTCAACCAACATGGAAGAATTCTGA

Translation (767 aa):
MATEGGKTSEPENNNKKPKTSGSQDSQPSPLALLAATCSKIGTPGENQATGQQQIIIDPSQGLVQLQNQP
QQLELVTTQLAGNAWQLVASTPPASKENNVSQPASSSSSSSSSNNGSASPTKTKSGNSSTPGQFQVIQVQ
NPSGSVQYQVIPQLQTVEGQQIQINPTSSSSLQDLQGQIQLISAGNNQAILTAANRTASGNILAQNLANQ
TVPVQIRPGVSIPLQLQTLPGTQAQVVTTLPINIGGVTLALPVINNVAAGGGTGQVGQPAATADSGTSNG
NQLVSTPTNTTTSASTMPESPSSSTTCTTTASTSLTSSDTLVSSADTGQYASTSASSSERTIEESQTPAA
TESEAQSSSQLQPNGMQNAQDQSNSLQQVQIVGQPILQQIQIQQPQQQIIQAIPPQSFQLQSGQTIQTIQ
QQPLQNVQLQAVNPTQVLIRAPTLTPSGQISWQTVQVQNIQSLSNLQVQNAGLSQQLTITPVSSSGGTTL
AQIAPVAVAGAPITLNTAQLASVPNLQTVSVANLGAAGVQVQGVPVTITSVAGQQQGQDGVKVQQATIAP
VTVAVGGIANATIGAVSPDQLTQVHLQQGQQTSDQEVQPGKRLRRVACSCPNCREGEGRGSNEPGKKKQH
ICHIEGCGKVYGKTSHLRAHLRWHTGERPFICNWMFCGKRFTRSDELQRHRRTHTGEKRFECPECSKRFM
RSDHLSKHVKTHQNKKGGGTALAIVTSGELDSSVTEVLGSPRIVTVAAISQDSNPATPNVSTNMEEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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