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Report for CCDS2210.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2210.1 Public Homo sapiens 2 MARCHF7 24 110 108 CCDS HistoryNCBI Gene:64844Re-query CCDS DB by CCDS ID:2210.1Re-query CCDS DB by GeneID:64844See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2210.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259050.8 ENSP00000259050.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000259050.8Link to Ensembl Protein Viewer:ENSP00000259050.3Re-query CCDS DB by Nucleotide ID:ENST00000259050Re-query CCDS DB by Protein ID:ENSP00000259050
Original member Current member EBI ENST00000409175.6 ENSP00000386830.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409175.6Link to Ensembl Protein Viewer:ENSP00000386830.1Re-query CCDS DB by Nucleotide ID:ENST00000409175Re-query CCDS DB by Protein ID:ENSP00000386830
Original member Current member NCBI NM_001282805.2 NP_001269734.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001282805.2Link to Protein Sequence:NP_001269734.1Re-query CCDS DB by Nucleotide ID:NM_001282805Re-query CCDS DB by Protein ID:NP_001269734Link to BLAST:NP_001269734.1
Original member Current member NCBI NM_001376234.1 NP_001363163.1 Accepted alive Link to Nucleotide Sequence:NM_001376234.1Link to Protein Sequence:NP_001363163.1Re-query CCDS DB by Nucleotide ID:NM_001376234Re-query CCDS DB by Protein ID:NP_001363163Link to BLAST:NP_001363163.1
Original member Current member NCBI NM_001376235.1 NP_001363164.1 Accepted alive Link to Nucleotide Sequence:NM_001376235.1Link to Protein Sequence:NP_001363164.1Re-query CCDS DB by Nucleotide ID:NM_001376235Re-query CCDS DB by Protein ID:NP_001363164Link to BLAST:NP_001363164.1
Original member Current member NCBI NM_001376236.1 NP_001363165.1 Accepted alive Link to Nucleotide Sequence:NM_001376236.1Link to Protein Sequence:NP_001363165.1Re-query CCDS DB by Nucleotide ID:NM_001376236Re-query CCDS DB by Protein ID:NP_001363165Link to BLAST:NP_001363165.1
Original member Current member NCBI NM_001376237.1 NP_001363166.1 Accepted alive Link to Nucleotide Sequence:NM_001376237.1Link to Protein Sequence:NP_001363166.1Re-query CCDS DB by Nucleotide ID:NM_001376237Re-query CCDS DB by Protein ID:NP_001363166Link to BLAST:NP_001363166.1
Original member Current member NCBI NM_001376238.1 NP_001363167.1 Accepted alive Link to Nucleotide Sequence:NM_001376238.1Link to Protein Sequence:NP_001363167.1Re-query CCDS DB by Nucleotide ID:NM_001376238Re-query CCDS DB by Protein ID:NP_001363167Link to BLAST:NP_001363167.1
Original member Current member NCBI NM_001376239.1 NP_001363168.1 Accepted alive Link to Nucleotide Sequence:NM_001376239.1Link to Protein Sequence:NP_001363168.1Re-query CCDS DB by Nucleotide ID:NM_001376239Re-query CCDS DB by Protein ID:NP_001363168Link to BLAST:NP_001363168.1
Original member Current member NCBI NM_001376240.1 NP_001363169.1 Accepted alive Link to Nucleotide Sequence:NM_001376240.1Link to Protein Sequence:NP_001363169.1Re-query CCDS DB by Nucleotide ID:NM_001376240Re-query CCDS DB by Protein ID:NP_001363169Link to BLAST:NP_001363169.1
Original member Current member NCBI NM_001376241.1 NP_001363170.1 Accepted alive Link to Nucleotide Sequence:NM_001376241.1Link to Protein Sequence:NP_001363170.1Re-query CCDS DB by Nucleotide ID:NM_001376241Re-query CCDS DB by Protein ID:NP_001363170Link to BLAST:NP_001363170.1
Original member Current member NCBI NM_001376242.1 NP_001363171.1 Accepted alive Link to Nucleotide Sequence:NM_001376242.1Link to Protein Sequence:NP_001363171.1Re-query CCDS DB by Nucleotide ID:NM_001376242Re-query CCDS DB by Protein ID:NP_001363171Link to BLAST:NP_001363171.1
Original member Current member NCBI NM_022826.4 NP_073737.1 Accepted alive Link to Nucleotide Sequence:NM_022826.4Link to Protein Sequence:NP_073737.1Re-query CCDS DB by Nucleotide ID:NM_022826Re-query CCDS DB by Protein ID:NP_073737Link to BLAST:NP_073737.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269734.1 704 Q9H992-1 704 100% 0 0
NP_001363163.1 704 Q9H992-1 704 100% 0 0
NP_001363164.1 704 Q9H992-1 704 100% 0 0
NP_001363165.1 704 Q9H992-1 704 100% 0 0
NP_001363166.1 704 Q9H992-1 704 100% 0 0
NP_001363167.1 704 Q9H992-1 704 100% 0 0
NP_001363168.1 704 Q9H992-1 704 100% 0 0
NP_001363169.1 704 Q9H992-1 704 100% 0 0
NP_001363170.1 704 Q9H992-1 704 100% 0 0
NP_001363171.1 704 Q9H992-1 704 100% 0 0
NP_073737.1 704 Q9H992-1 704 100% 0 0

Chromosomal Locations for CCDS 2210.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 159729023 159729175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159743061 159743253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159745770 159745937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159747805 159748903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159752402 159752571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159759226 159759335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159762880 159762993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159764626 159764674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 159767284 159767342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2115 nt):
ATGGAGTCTAAACCTTCAAGGATTCCAAGAAGAATTTCTGTTCAACCTTCCAGCTCCTTAAGTGCTAGGA
TGATGTCTGGAAGCAGAGGAAGTAGTTTAAATGATACCTATCACTCAAGAGACTCTTCATTTAGATTGGA
TTCTGAATATCAGTCTACATCAGCATCAGCATCTGCGTCACCATTTCAATCTGCATGGTATAGTGAATCT
GAGATAACTCAGGGAGCACGCTCAAGATCGCAGAACCAGCAACGGGATCATGATTCAAAAAGACCTAAAC
TTTCCTGTACAAACTGTACTACCTCAGCTGGGAGAAATGTTGGAAATGGTTTAAACACATTATCAGATTC
ATCTTGGAGGCATAGTCAAGTTCCTAGATCTTCATCAATGGTACTTGGATCATTTGGAACAGACTTAATG
AGAGAGAGGAGAGATTTGGAGAGAAGAACAGATTCCTCTATTAGTAATCTTATGGATTATAGTCACCGAA
GTGGTGATTTCACAACTTCATCATATGTTCAAGACAGAGTTCCTTCATATTCACAAGGAGCAAGACCAAA
AGAAAACTCAATGAGCACTTTACAGTTGAATACATCATCCACAAACCACCAATTGCCTTCTGAACATCAG
ACCATACTAAGTTCTAGGGACTCCAGAAATTCTTTAAGATCAAATTTTTCTTCAAGAGAATCAGAATCTT
CCCGAAGCAATACGCAGCCTGGATTTTCTTACAGTTCAAGTAGAGATGAAGCCCCAATCATAAGCAATTC
AGAAAGGGTTGTTTCATCTCAAAGACCATTTCAAGAATCTTCTGACAATGAAGGTAGGCGGACAACGAGG
AGATTGCTGTCACGCATAGCTTCTAGCATGTCATCTACTTTTTTTTCACGAAGATCTAGTCAGGATTCCT
TGAATACAAGATCATTGAATTCTGAAAATTCTTACGTTTCTCCAAGAATCTTGACAGCTTCACAGTCCCG
TAGTAATGTACCATCAGCTTCTGAAGTTCCCGATAATAGGGCATCTGAAGCTTCTCAGGGATTTCGATTT
CTTAGGCGAAGATGGGGTTTGTCATCTCTTAGCCACAATCATAGCTCTGAGTCAGATTCAGAAAATTTTA
ACCAAGAATCTGAAGGTAGAAATACAGGACCATGGTTATCTTCCTCACTTAGAAATAGATGCACACCTTT
GTTCTCTAGAAGGAGGCGAGAGGGAAGAGATGAATCTTCAAGGATACCTACCTCTGATACATCATCTAGA
TCTCATATTTTTAGAAGAGAATCAAATGAAGTGGTTCACCTTGAAGCACAGAATGATCCTCTTGGAGCTG
CTGCCAACAGACCACAAGCATCTGCAGCATCAAGCAGTGCCACAACAGGTGGCTCTACATCAGATTCGGC
TCAAGGTGGAAGAAATACAGGAATATCAGGGATTCTTCCTGGTTCCTTATTCCGGTTTGCAGTCCCTCCA
GCACTTGGGAGTAATTTGACCGACAATGTCATGATCACAGTAGATATTATTCCTTCAGGTTGGAATTCAG
CTGATGGTAAAAGTGATAAAACTAAAAGTGCGCCTTCAAGAGATCCAGAAAGATTGCAGAAAATAAAAGA
GAGCCTCCTTTTAGAGGACTCAGAAGAAGAAGAAGGTGACTTATGTAGAATTTGTCAAATGGCAGCTGCA
TCATCATCTAATTTGCTGATAGAGCCATGCAAGTGCACAGGAAGTTTGCAGTATGTCCACCAAGACTGTA
TGAAAAAGTGGTTACAGGCCAAAATTAACTCTGGTTCTTCATTAGAAGCTGTAACCACCTGTGAACTATG
TAAAGAGAAGTTGGAGCTTAACCTGGAGGATTTTGATATTCATGAACTACATAGAGCTCATGCAAATGAA
CAAGCTGAGTATGAGTTTATCAGCTCTGGTCTCTACCTAGTGGTGTTATTGCACTTGTGCGAACAAAGCT
TTTCTGATATGATGGGAAATACAAATGAACCAAGCACACGTGTCCGATTTATTAACCTTGCAAGAACTCT
TCAGGCACATATGGAAGATCTCGAAACTTCAGAGGATGATTCCGAAGAAGACGGAGACCATAACAGGACA
TTTGATATTGCCTAA

Translation (704 aa):
MESKPSRIPRRISVQPSSSLSARMMSGSRGSSLNDTYHSRDSSFRLDSEYQSTSASASASPFQSAWYSES
EITQGARSRSQNQQRDHDSKRPKLSCTNCTTSAGRNVGNGLNTLSDSSWRHSQVPRSSSMVLGSFGTDLM
RERRDLERRTDSSISNLMDYSHRSGDFTTSSYVQDRVPSYSQGARPKENSMSTLQLNTSSTNHQLPSEHQ
TILSSRDSRNSLRSNFSSRESESSRSNTQPGFSYSSSRDEAPIISNSERVVSSQRPFQESSDNEGRRTTR
RLLSRIASSMSSTFFSRRSSQDSLNTRSLNSENSYVSPRILTASQSRSNVPSASEVPDNRASEASQGFRF
LRRRWGLSSLSHNHSSESDSENFNQESEGRNTGPWLSSSLRNRCTPLFSRRRREGRDESSRIPTSDTSSR
SHIFRRESNEVVHLEAQNDPLGAAANRPQASAASSSATTGGSTSDSAQGGRNTGISGILPGSLFRFAVPP
ALGSNLTDNVMITVDIIPSGWNSADGKSDKTKSAPSRDPERLQKIKESLLLEDSEEEEGDLCRICQMAAA
SSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKLELNLEDFDIHELHRAHANE
QAEYEFISSGLYLVVLLHLCEQSFSDMMGNTNEPSTRVRFINLARTLQAHMEDLETSEDDSEEDGDHNRT
FDIA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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