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Report for CCDS75436.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75436.1 Public Homo sapiens 6 TULP1 24 110 108 CCDS HistoryNCBI Gene:7287Re-query CCDS DB by CCDS ID:75436.1Re-query CCDS DB by GeneID:7287See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75436.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322263.8 ENSP00000319414.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000322263.8Link to Ensembl Protein Viewer:ENSP00000319414.4Re-query CCDS DB by Nucleotide ID:ENST00000322263Re-query CCDS DB by Protein ID:ENSP00000319414
Original member Current member NCBI NM_001289395.2 NP_001276324.1 Accepted alive Link to Nucleotide Sequence:NM_001289395.2Link to Protein Sequence:NP_001276324.1Re-query CCDS DB by Nucleotide ID:NM_001289395Re-query CCDS DB by Protein ID:NP_001276324Link to BLAST:NP_001276324.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276324.1 489 O00294-2 489 100% 0 0

Chromosomal Locations for CCDS 75436.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 35498327 35498460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35499981 35500152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35503559 35503657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35503737 35503848 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35505741 35505853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35506003 35506173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35506274 35506279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35509209 35509312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35509634 35509750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35509827 35509928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35510861 35511010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35512180 35512270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35512639 35512690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35512812 35512858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1470 nt):
ATGCCTCTGCGGGATGAAACCCTCCGAGAGGTGTGGGCCTCTGACAGTGGGCATGAAGAAGAAAGCCTGA
GCCCGGAGGCCCCGCGGCGCCCCAAACAGCGACCCGCCCCGGCACAGAGGCTAAGGAAGAAGAGGACGGA
GGCCCCCGAATCCCCCTGCCCCACGGGATCCAAGCCCCGGAAGCCCGGAGAGGAGGAGGAGGAAGAGGAG
GACGAGGAGGACGAGGAAGAGGAGGCAGAGGAAAAGAAAGAGAAAATCCTTCTGCCTCCCAAGAAGCCCC
TGAGAGAGAAGAGCTCCGCAGACCTGAAGGAGAGGAGGGCCAAGGCCCAGGGCCCAAGGGGAGACCTGGG
AAGCCCTGACCCCCCACCGAAACCTCTGCGTGTTAGGAATAAGGAAGCTCCAGCAGGGGAGGGGACCAAG
ATGAGAAAGACCAAGAAGAAAGGGTCTGGGGAGGCCGACAAGGACCCCTCAGGGAGCCCAGCCAGTGCGA
GGAAGAGCCCAGCAGCCATGTTTCTGGTTGGGGAAGGCAGTCCTGACAAGAAAGCCCTGAAGAAGAAAGG
CACTCCCAAAGGCGCGAGGAAGGAGGAAGAAGAGGAGGAGGAGGCAGCTACGGTGATAAAGAAGAGCAAT
CAAAAGGGCAAAGCCAAAGGAAAAGGCAAAAAGAAAGCGAAGGAGGAGAGGGCCCCGTCTCCCCCCGTGG
AGGTGGACGAACCCCGGGAGTTTGTGCTCCGGCCTGCCCCCCAGGGCCGCACGGTGCGCTGCCGGCTGAC
CCGGGACAAAAAGGGCATGGATCGAGGCATGTATCCCTCCTACTTCCTGCACCTGGACACGGAGAAGAAG
GTGTTCCTCTTGGCTGGCAGGAAACGAAAACGGAGCAAGACAGCCAATTACCTCATCTCCATCGACCCTA
CCAATCTGTCCCGAGGAGGGGAGAATTTCATCGGGAAGCTGAGGTCCAACCTCCTGGGGAACCGCTTCAC
GGTCTTTGACAACGGGCAGAACCCACAGCGTGGGTACAGCACTAATGTGGCAAGCCTTCGGCAGGAGCTG
GCAGCTGTGATCTATGAAACCAACGTGCTGGGCTTCCGTGGCCCCCGGCGCATGACCGTCATCATTCCTG
GCATGAGTGCGGAGAACGAGAGGGTCCCCATCCGGCCCCGAAATGCTAGTGACGGCCTGCTGGTGCGCTG
GCAGAACAAGACGCTGGAGAGCCTCATAGAACTGCACAACAAGCCACCTGTCTGGAACGATGACAGTGGC
TCCTACACCCTCAACTTCCAAGGCCGGGTCACCCAGGCCTCAGTCAAGAACTTCCAGATTGTCCACGCTG
ATGACCCCGACTATATCGTGCTGCAGTTCGGCCGCGTGGCGGAGGACGCCTTCACCCTAGACTACCGGTA
CCCGCTGTGCGCCCTGCAGGCCTTCGCCATCGCCCTCTCCAGTTTCGACGGGAAGCTGGCCTGCGAGTGA

Translation (489 aa):
MPLRDETLREVWASDSGHEEESLSPEAPRRPKQRPAPAQRLRKKRTEAPESPCPTGSKPRKPGEEEEEEE
DEEDEEEEAEEKKEKILLPPKKPLREKSSADLKERRAKAQGPRGDLGSPDPPPKPLRVRNKEAPAGEGTK
MRKTKKKGSGEADKDPSGSPASARKSPAAMFLVGEGSPDKKALKKKGTPKGARKEEEEEEEAATVIKKSN
QKGKAKGKGKKKAKEERAPSPPVEVDEPREFVLRPAPQGRTVRCRLTRDKKGMDRGMYPSYFLHLDTEKK
VFLLAGRKRKRSKTANYLISIDPTNLSRGGENFIGKLRSNLLGNRFTVFDNGQNPQRGYSTNVASLRQEL
AAVIYETNVLGFRGPRRMTVIIPGMSAENERVPIRPRNASDGLLVRWQNKTLESLIELHNKPPVWNDDSG
SYTLNFQGRVTQASVKNFQIVHADDPDYIVLQFGRVAEDAFTLDYRYPLCALQAFAIALSSFDGKLACE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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