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Report for CCDS46067.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46067.1 Public Homo sapiens 19 YIF1B 24 110 108 CCDS HistoryNCBI Gene:90522Re-query CCDS DB by CCDS ID:46067.1Re-query CCDS DB by GeneID:90522See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46067.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337679.12 ENSP00000337411.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337679.12Link to Ensembl Protein Viewer:ENSP00000337411.7Re-query CCDS DB by Nucleotide ID:ENST00000337679Re-query CCDS DB by Protein ID:ENSP00000337411
Original member Current member NCBI NM_001145463.2 NP_001138935.1 Accepted alive Link to Nucleotide Sequence:NM_001145463.2Link to Protein Sequence:NP_001138935.1Re-query CCDS DB by Nucleotide ID:NM_001145463Re-query CCDS DB by Protein ID:NP_001138935Link to BLAST:NP_001138935.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138935.1 291 Q5BJH7-4 291 100% 0 0

Chromosomal Locations for CCDS 46067.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 38305489 38305507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38306914 38306990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38307428 38307521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38307597 38307752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38308792 38308849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38308979 38309057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38309224 38309328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38309405 38309643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38315869 38315917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGCACCCGGCAGGCTTGGCGGCGGCGGCTGCGGGGACGCCCCGGCTGCCCTCGAAGCGGAGGATCCCTG
TGTCCCAGCCGGGCATGGCCGACCCCCACCAGCTTTTCGATGACACAAGTTCAGCCCAGAGCCGGGGCTA
TGGGGCCCAGCGGGCACCTGGTGGCCTGAGTTATCCTGCAGCCTCTCCCACGCCCCATGCAGCCTTCCTG
GCTGACCCGGTGTCCAACATGGCCATGGCCTATGGGAGCAGCCTGGCCGCGCAGGGCAAGGAGCTGGTGG
ATAAGAACATCGACCGCTTCATCCCCATCACCAAGCTCAAGTATTACTTTGCTGTGGACACCATGTATGT
GGGCAGAAAGCTGGGCCTGCTGTTCTTCCCCTACCTACACCAGGACTGGGAAGTGCAGTACCAACAGGAC
ACCCCGGTGGCCCCCCGCTTTGACGTCAATGCCCCGGACCTCTACATTCCAGCAATGGCTTTCATCACCT
ACGTTTTGGTGGCTGGTCTTGCGCTGGGGACCCAGGATAGGTTCTCCCCAGACCTCCTGGGGCTGCAAGC
GAGCTCAGCCCTGGCCTGGCTGACCCTGGAGGTGCTGGCCATCCTGCTCAGCCTCTATCTGGTCACTGTC
AACACCGACCTCACCACCATCGACCTGGTGGCCTTCTTGGGCTACAAATATGTCGGGATGATTGGCGGGG
TCCTCATGGGCCTGCTCTTCGGGAAGATTGGCTACTACCTGGTGCTGGGCTGGTGCTGCGTAGCCATCTT
TGTGTTCATGTTTCCCCTTTTGCCGGGCGCGGTGGCTCATGCTTGTAATCCCAGCACTTTGGGAGGCCGA
GGCGGTCGGATCACGAGATCCGGACGCTGCGGCTGA

Translation (291 aa):
MHPAGLAAAAAGTPRLPSKRRIPVSQPGMADPHQLFDDTSSAQSRGYGAQRAPGGLSYPAASPTPHAAFL
ADPVSNMAMAYGSSLAAQGKELVDKNIDRFIPITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQD
TPVAPRFDVNAPDLYIPAMAFITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLVTV
NTDLTTIDLVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMFPLLPGAVAHACNPSTLGGR
GGRITRSGRCG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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