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Report for CCDS9810.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9810.1 Public Homo sapiens 14 DCAF4 24 110 108 CCDS HistoryNCBI Gene:26094Re-query CCDS DB by CCDS ID:9810.1Re-query CCDS DB by GeneID:26094See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9810.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394234.6 ENSP00000377781.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394234.6Link to Ensembl Protein Viewer:ENSP00000377781.2Re-query CCDS DB by Nucleotide ID:ENST00000394234Re-query CCDS DB by Protein ID:ENSP00000377781
Original member Current member NCBI NM_181340.3 NP_851937.1 Accepted alive Link to Nucleotide Sequence:NM_181340.3Link to Protein Sequence:NP_851937.1Re-query CCDS DB by Nucleotide ID:NM_181340Re-query CCDS DB by Protein ID:NP_851937Link to BLAST:NP_851937.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_851937.1 395 Q8WV16-4 395 100% 0 0

Chromosomal Locations for CCDS 9810.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 72940327 72940377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72941745 72941824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72942994 72943096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72945884 72946027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72947142 72947191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72951798 72951877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72954164 72954262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72954386 72954483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72955523 72955696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72956386 72956500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 72958612 72958805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1188 nt):
ATGGAGAGCAAGAGACTGCGGCTGCTCCAGGAAGAAGACAGACGGAAAAAGATTGCCAGGATGGGATTTA
ATGCATCTTCCATGCTACGAAAAAGCCAGCTGGGTTTTCTCAACGTCACCAATTACTGCCATTTAGCCCA
CGAGCTGCGTCTCAGCTGCATGGAGAGGAAAAAGGTCCAGATTCGAAGCATGGATCCCTCCGCCTTGGCA
AGCGACCGATTTAACCTCATACTGGCAGATACCAACAGTGACCGGCTCTTCACAGTGAACGATGTTAAAG
TTGGAGGCTCCAAGTATGGTATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTCAAGGTGTTCATGCA
CGAAAACCTCTACTTCACCAACCGGAAGGTGAATTCGGTGTGCTGGGCCTCGCTGAATCACTTGGATTCC
CACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCACCCTGCTCCCAGCATCACTGT
TCGTCAATAGTCACCCAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCCGGATCCCTGGTGCCTGGTC
CTGTGCCTGGTCCCTGAATATCCAAGCAAATAACTGCTTCAGTACAGGCTTGTCTCGGCGGGTCCTGTTG
ACCAACGTGGTGACGGGACACCGGCAGTCCTTTGGGACCAACAGTGATGTCTTGGCCCAGCAGTTTGCTC
TCATGGCTCCTCTGCTGTTTAATGGCTGCCGCTCTGGGGAAATCTTTGCCATTGATCTGCGTTGTGGAAA
TCAAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATGATTCAGCAGTGACCTCTGTGCGGATCCTCCAA
GATGAGCAATACCTGATGGCTTCAGACATGGCTGGAAAGATCAAGCTGTGGGACCTGAGGACCACGAAGT
GCGTAAGGCAGTACGAAGGCCACGTGAATGAGTACGCCTACCTGCCCCTGCATGTGCACGAGGAAGAAGG
AATCCTGGTGGCAGTGGGCCAGGACTGCTACACGAGAATCTGGAGCCTCCACGATGCCCGCCTACTGAGA
ACCATACCCTCCCCGTACCCTGCCTCCAAGGCCGACATTCCCAGTGTGGCCTTCTCGTCGCGGCTGGGGG
GCTCCCGGGGCGCGCCGGGGCTGCTCATGGCTGTCGGGCAGGACCTTTACTGTTACTCCTACAGCTAA

Translation (395 aa):
MESKRLRLLQEEDRRKKIARMGFNASSMLRKSQLGFLNVTNYCHLAHELRLSCMERKKVQIRSMDPSALA
SDRFNLILADTNSDRLFTVNDVKVGGSKYGIINLQSLKTPTLKVFMHENLYFTNRKVNSVCWASLNHLDS
HILLCLMGLAETPGCATLLPASLFVNSHPGIDRPGMLCSFRIPGAWSCAWSLNIQANNCFSTGLSRRVLL
TNVVTGHRQSFGTNSDVLAQQFALMAPLLFNGCRSGEIFAIDLRCGNQGKGWKATRLFHDSAVTSVRILQ
DEQYLMASDMAGKIKLWDLRTTKCVRQYEGHVNEYAYLPLHVHEEEGILVAVGQDCYTRIWSLHDARLLR
TIPSPYPASKADIPSVAFSSRLGGSRGAPGLLMAVGQDLYCYSYS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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