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Report for CCDS58671.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58671.1 Public Homo sapiens 19 TEAD2 24 110 108 CCDS HistoryNCBI Gene:8463Re-query CCDS DB by CCDS ID:58671.1Re-query CCDS DB by GeneID:8463See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58671.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377214.8 ENSP00000366419.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000377214.8Link to Ensembl Protein Viewer:ENSP00000366419.4Re-query CCDS DB by Nucleotide ID:ENST00000377214Re-query CCDS DB by Protein ID:ENSP00000366419
Original member Current member EBI ENST00000601519.5 ENSP00000469672.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000601519.5Link to Ensembl Protein Viewer:ENSP00000469672.1Re-query CCDS DB by Nucleotide ID:ENST00000601519Re-query CCDS DB by Protein ID:ENSP00000469672
Original member Current member NCBI NM_001256658.2 NP_001243587.1 Accepted alive Link to Nucleotide Sequence:NM_001256658.2Link to Protein Sequence:NP_001243587.1Re-query CCDS DB by Nucleotide ID:NM_001256658Re-query CCDS DB by Protein ID:NP_001243587Link to BLAST:NP_001243587.1
Original member Current member NCBI NM_001256659.2 NP_001243588.1 Accepted alive Link to Nucleotide Sequence:NM_001256659.2Link to Protein Sequence:NP_001243588.1Re-query CCDS DB by Nucleotide ID:NM_001256659Re-query CCDS DB by Protein ID:NP_001243588Link to BLAST:NP_001243588.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243587.1 450 Q15562-2 450 100% 0 0
NP_001243588.1 450 Q15562-2 450 100% 0 0

Chromosomal Locations for CCDS 58671.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 49341324 49341437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49342438 49342590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49343231 49343398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49347190 49347363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49348703 49348845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49351301 49351365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49355148 49355206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49355303 49355419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49357252 49357314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49359435 49359499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49359844 49360075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1353 nt):
ATGGGGGAACCCCGGGCTGGGGCCGCCCTGGACGATGGCAGCGGCTGGACGGGCAGTGAGGAAGGCAGTG
AGGAGGGTACCGGCGGCAGTGAGGGGGCTGGGGGTGACGGGGGCCCGGATGCAGAGGGGGTGTGGAGCCC
AGACATTGAGCAGAGCTTCCAGGAGGCCCTGGCCATCTATCCACCCTGCGGCCGCCGGAAAATAATTTTG
TCTGATGAAGGCAAGATGTATGGTCGGAATGAACTGATCGCCCGCTACATCAAGCTGAGAACGGGGAAGA
CCCGAACTCGAAAACAGGTTTCTAGTCACATCCAGGTTTTGGCCCGAAGGAAATCAAGGGAAATCCAGTC
CAAGTTGAAGGACCAGGTTTCCAAGGACAAGGCTTTCCAGACAATGGCAACCATGTCCTCTGCCCAGCTC
ATCTCCGCGCCTTCTCTGCAGGCCAAACTGGGTCCCACTGGTCCTCAGGTGGTCCAGGCCTCTGAGCTTT
TCCAGTTTTGGTCTGGAGGATCTGGGCCCCCCTGGAATGTTCCAGATGTGAAGCCATTCTCACAGACACC
GTTCACCTTGTCACTGACTCCCCCATCTACTGACCTCCCAGGGTACGAGCCCCCCCAAGCCCTCTCACCC
CTGCCCCCACCTACCCCATCGCCCCCAGCCTGGCAGGCTCGGGGCCTGGGCACCGCCCGGTTGCAGCTGG
TAGAGTTCTCAGCCTTCGTGGAACCGCCAGATGCAGTTGATTCTTACCAGAGGCACCTGTTCGTGCACAT
CAGCCAGCACTGCCCCAGCCCCGGAGCGCCGCCGCTCGAGAGTGTGGACGTCCGGCAGATCTACGACAAA
TTCCCTGAGAAAAAGGGTGGCCTCCGAGAGCTATATGATCGTGGCCCCCCCCATGCCTTCTTCCTGGTCA
AGTTCTGGGCGGACCTGAACTGGGGCCCAAGTGGTGAGGAGGCAGGGGCCGGTGGCAGCATCAGCAGTGG
TGGCTTCTACGGAGTGAGCAGCCAGTATGAGAGCCTGGAACACATGACCCTCACCTGTTCCTCCAAGGTC
TGCTCTTTTGGCAAGCAGGTGGTGGAGAAGGTGGAGACGGAACGGGCCCAGCTGGAGGACGGCAGATTTG
TGTACCGCCTGCTGCGCTCGCCCATGTGCGAGTACCTGGTGAATTTCTTGCACAAGTTGCGGCAGCTGCC
TGAGCGATACATGATGAACAGCGTCCTGGAAAACTTCACCATCCTCCAGGTGGTGACAAACAGAGACACC
CAGGAACTGCTGCTCTGCACCGCCTATGTCTTCGAGGTCTCCACCAGCGAGCGTGGGGCCCAGCATCACA
TTTACCGCCTGGTCAGGGACTGA

Translation (450 aa):
MGEPRAGAALDDGSGWTGSEEGSEEGTGGSEGAGGDGGPDAEGVWSPDIEQSFQEALAIYPPCGRRKIIL
SDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSREIQSKLKDQVSKDKAFQTMATMSSAQL
ISAPSLQAKLGPTGPQVVQASELFQFWSGGSGPPWNVPDVKPFSQTPFTLSLTPPSTDLPGYEPPQALSP
LPPPTPSPPAWQARGLGTARLQLVEFSAFVEPPDAVDSYQRHLFVHISQHCPSPGAPPLESVDVRQIYDK
FPEKKGGLRELYDRGPPHAFFLVKFWADLNWGPSGEEAGAGGSISSGGFYGVSSQYESLEHMTLTCSSKV
CSFGKQVVEKVETERAQLEDGRFVYRLLRSPMCEYLVNFLHKLRQLPERYMMNSVLENFTILQVVTNRDT
QELLLCTAYVFEVSTSERGAQHHIYRLVRD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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