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Report for CCDS14181.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14181.1 Public Homo sapiens X NHS 24 110 108 CCDS HistoryNCBI Gene:4810Re-query CCDS DB by CCDS ID:14181.1Re-query CCDS DB by GeneID:4810See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14181.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380060.7 ENSP00000369400.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380060.7Link to Ensembl Protein Viewer:ENSP00000369400.3Re-query CCDS DB by Nucleotide ID:ENST00000380060Re-query CCDS DB by Protein ID:ENSP00000369400
Original member Current member NCBI NM_198270.4 NP_938011.1 Accepted alive Link to Nucleotide Sequence:NM_198270.4Link to Protein Sequence:NP_938011.1Re-query CCDS DB by Nucleotide ID:NM_198270Re-query CCDS DB by Protein ID:NP_938011Link to BLAST:NP_938011.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_938011.1 1630 Q6T4R5-2 1630 100% 0 0

Chromosomal Locations for CCDS 14181.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 17375758 17376322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17687742 17687894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17692335 17692468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17721441 17721633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17724299 17724430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17725347 17728328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17728649 17728775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 17731858 17732464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4893 nt):
ATGCCTTTCGCCAAGCGGATCGTGGAGCCGCAATGGCTGTGCAGGCAGCGGCGCCCTGCGCCCGGCCCAG
CAGTGGACGCGAGCGGAGGCAGCGCTGAGCCGCCGCCGCCCTTGCAGCCGCCGGGCCGGAGGGACCTGGA
CGAGGTCGAGGCGCCAGGGCCAGAGGAGCCAGCCCGCGCCGTCCCTGCACCTTCAGGGCTGCCACCGCCG
CCGCCGCCACTGCCCGCGCCGGCCGACCAGACTCAGCCGCCGCACGGAGAGGCGTCCGTGGCTGGCGAGG
AGAGCACGGCGGGGATCCCGGAGGCGGCGCCCGCAGCCGGCGAGGCGTCCTCGGCGGCGGCGGCGGCGGC
CGTGCTGCTCATGCTGGACCTATGCGCGGTCAGCAACGCCGCTCTGGCCCGTGTCCTCCGGCAGCTCTCG
GACGTGGCCCGGCACGCTTGCAGCCTCTTCCAGGAGCTCGAGAGCGACATCCAGCTCACCCACCGCCGCG
TCTGGGCGCTGCAGGGCAAGCTCGGCGGCGTGCAGCGCGTCCTCAGCACGCTTGACCCTAAGCAGGAGGC
AGTGCCCGTCTCCAACCTGGACATAGAGAGTAAGCTGAGTGTGTACTACCGCGCCCCGTGGCACCAGCAG
CGCAACATCTTCCTCCCAGCCACAAGGCCACCCTGCGTGGAGGAGCTGCACCGCCACGCCCGGCAGAGCC
TGCAAGCCCTGCGCAGAGAACACCGGAGCCGGAGCGATCGCCGAGAGCAAAGAGCAGCTGCCCCCCTTTC
CATTGCAGCTCCTCCACTGCCAGCCTACCCTCCAGCTCACAGCCAGAGGAGGCGTGAGTTTAAGGACCGT
CACTTTTTAACGTCCCATCCCCCAGAGGATGAAGATACAGATGTCATGTTAGGGCAGAGGCCGAAAAACC
CAATACACAATATCCCTTCCACACTGGACAAGCAGACCAACTGGAGCAAAGCACTACCTCTCCCGACGCC
AGAGGAGAAGATGAAACAAGATGCCCAAGTGATTTCTTCTTGCATTATTCCCATCAATGTTACTGGAGTT
GGCTTTGACAGAGAGGCTAGTATACGCTGCTCTCTGGTTCATTCACAATCGGTACTACAGCGGAGACGAA
AATTGAGGAGGAGGAAAACCATCTCGGGTATCCCCAGAAGAGTTCAACAAGAAATAGATTCTGATGAATC
ACCAGTGGCCAGGGAAAGGAATGTGATTGTGCACACAAACCCAGACCCCTCCAACACTGTCAATAGGATA
TCCGGAACCAGGGACTCTGAGTGCCAAACCGAGGATATTCTGATTGCTGCCCCATCCAGAAGGAGAATCA
GAGCTCAAAGGGGTCAAAGCATTGCAGCTTCCCTTTCTCATTCTGCTGGCAACATTTCTGCCCTAGCAGA
CAAAGGTGACACCATGTTTACTCCTGCAGTGAGCAGCCGCACAAGATCTCGGAGCCTTCCCCGGGAAGGT
AATAGAGGTGGGGATGCTGAGCCCAAAGTTGGCGCTAAACCCTCAGCATATGAAGAGGGAGAGTCTTTTG
TGGGTGACCATGAAAGAACCCCTAATGATTTCAGTGAGGCTCCAAGCAGCCCGAGTGCCCAGGACCACCA
GCCTACTTTGGGCCTGGCCTGCTCTCAACATCTTCACAGCCCCCAGCACAAATTAAGTGAGAGGGGAAGG
TCACGTCTGTCCCGAATGGCTGCTGACTCTGGCAGCTGTGACATCTCCTCCAACTCAGACACGTTTGGGA
GCCCCATCCACTGCATCTCCACGGCTGGCGTCCTCCTTAGCAGCCACATGGACCAGAAAGATGACCACCA
GTCATCCAGTGGCAACTGGAGTGGGAGCAGCTCCACGTGCCCCTCGCAGACCTCAGAAACCATCCCTCCT
GCAGCTTCTCCTCCACTCACTGGCTCTTCACACTGTGACTCGGAGTTGTCACTAAACACAGCCCCTCATG
CCAATGAGGATGCCAGTGTTTTCGTGACAGAGCAATACAATGACCACTTGGATAAAGTGAGAGGCCATCG
GGCAAACTCCTTTACCTCCACTGTTGCAGACCTGCTGGATGATCCCAACAACAGCAACACAAGTGACAGT
GAGTGGAATTACCTACACCACCACCATGATGCCTCCTGCCGCCAGGATTTTAGTCCTGAGCGTCCCAAGG
CAGACAGCCTGGGCTGCCCAAGCTTCACAAGCATGGCCACTTATGACAGCTTTCTGGAAAAGTCTCCATC
AGACAAAGCGGACACTAGCTCTCACTTTTCAGTAGACACGGAAGGATACTATACCTCCATGCACTTTGAC
TGTGGTCTCAAAGGTAATAAGAGCTATGTCTGTCACTATGCAGCCCTGGGCCCAGAGAATGGCCAGGGTG
TAGGGGCTTCCCCTGGTCTTCCAGATTGTGCCTGGCAGGACTACTTAGACCACAAGAGGCAGGGAAGACC
AAGCATCTCTTTCAGGAAACCAAAGGCAAAGCCGACCCCACCTAAACGTAGCTCATCATTGAGGAAGTCT
GATGGAAACGCAGATATTTCTGAGAAGAAAGAACCAAAGATAAGCAGTGGTCAGCACCTGCCTCACAGTT
CCAGGGAAATGAAGCTGCCTCTTGATTTCGCCAACACGCCTTCTCGAATGGAAAACGCCAATCTTCCCAC
CAAGCAGGAACCTTCTTGGATAAACCAGAGTGAACAAGGCATTAAGGAACCTCAGTTAGATGCTTCGGAT
ATTCCACCATTCAAAGATGAAGTTGCCGAATCCACACACTATGCAGACCTCTGGCTCCTAAATGACTTGA
AAACAAATGATCCTTATAGATCTCTATCTAATTCAAGCACCGCTACGGGTACCACAGTCATTGAATGCAT
CAAATCTCCAGAGAGCTCTGAATCCCAAACATCACAATCAGAATCAAGAGCCACCACCCCATCTCTTCCT
TCTGTTGACAATGAGTTTAAACTGGCTTCACCAGAAAAGCTGGCTGGCTTGGCATCTCCATCAAGTGGCT
ATTCAAGCCAGTCTGAAACGCCAACATCCTCTTTCCCTACAGCTTTCTTTTCAGGTCCATTGTCTCCCGG
AGGTAGCAAAAGAAAACCTAAAGTCCCAGAAAGAAAATCCTCACTACAGCAACCCTCTTTAAAAGATGGA
ACTATATCACTGAGTAAAGACCTTGAACTTCCAATTATACCTCCTACCCATCTTGATCTAAGTGCTCTTC
ATAATGTCTTGAACAAACCATTCCACCACCGTCATCCACTGCATGTTTTTACTCATAATAAGCAGAACAC
AGTAGGAGAAACACTGAGGTCGAATCCTCCACCGTCCCTTGCAATTACACCAACGATCCTGAAATCTGTT
AACCTTAGGTCCATCAACAAGTCTGAAGAAGTTAAGCAAAAAGAAGAAAACAATACAGATCTCCCTTATT
TAGAGGAAAGCACACTCACAACGGCTGCCTTGTCTCCAAGTAAGATTAGGCCGCATACAGCAAATAAATC
AGTATCTCGTCAATACTCCACTGAAGACACCATACTGTCCTTTTTAGACTCTTCTGCAGTTGAGATGGGA
CCAGATAAACTACATTTAGAAAAAAACTCTACTTTTGATGTGAAGAATCGCTGCGATCCAGAAACCATAA
CATCAGCTGGTAGCAGTCTTCTAGATTCAAATGTCACAAAAGACCAAGTGCGTACAGAGACTGAGCCTAT
TCCAGAAAACACGCCAACCAAAAACTGTGCTTTTCCCACAGAAGGATTTCAGAGGGTCTCTGCTGCCCGC
CCAAATGATTTGGATGGTAAAATAATACAATATGGACCTGGTCCAGACGAAACTCTAGAACAGGTACAGA
AGGCACCCTCTGCAGGTCTGGAGGAAGTTGCACAACCTGAATCTGTGGATGTAATCACATCTCAGTCAGA
CTCACCAACTAGAGCAACAGATGTAAGCAATCAATTTAAGCATCAATTTGTTATGAGCCGCCACCATGAC
AAAGTGCCTGGTACTATCAGCTATGAATCGGAGATAACATCTGTAAATTCATTCCCTGAAAAATGTTCCA
AGCAGGAAAATATTGCTTCAGGTATTTCAGCCAAAAGTGCCTCTGATAACAGCAAAGCAGAGGAGACCCA
AGGAAATGTGGATGAGGCTTCATTGAAAGAATCATCACCGAGTGATGACTCCATCATTTCACCACTTAGT
GAAGACTCCCAAGCTGAAGCAGAGGGTGTGTTCGTGTCTCCAAACAAACCTCGAACAACTGAGGATTTAT
TTGCAGTCATTCACAGATCCAAGAGGAAAGTACTTGGAAGAAAAGATTCCGGGGACATGTCTGTTCGAAG
CAAATCGAGAGCTCCCCTCAGCAGTAGCAGCAGCAGCGCCAGTTCCATCACTTCACCCAGCAGTAATGTG
ACAACCCCCAACAGCCAGAGGTCTCCTGGTCTCATATACCGAAATGCCAAAAAGTCCAACACATCCAATG
AAGAGTTTAAGCTGTTACTGCTCAAGAAAGGCAGTCGCTCAGATTCTAGTTACCGCATGTCTGCCACTGA
GATCCTGAAGAGCCCCATACTGCCCAAACCTCCTGGGGAGCTCACAGCAGAGTCCCCTCAGAGCACCGAT
GATGCCCATCAGGGGTCACAAGGGGCTGAGGCATTGTCCCCACTCTCTCCATGCTCCCCACGAGTTAATG
CAGAAGGCTTTTCCTCGAAGAGCTTTGCCACCTCAGCATCAGCAAGGGTTGGACGTTCTCGGGCCCCTCC
TGCAGCCAGCAGCAGCCGCTACAGTGTCCGCTGCCGGCTGTACAATACGCCCATGCAGGCAATCTCCGAG
GGAGAGACGGAAAATTCTGACGGGAGCCCACATGACGACCGTTCCTCCCAGAGTTCAACATAG

Translation (1630 aa):
MPFAKRIVEPQWLCRQRRPAPGPAVDASGGSAEPPPPLQPPGRRDLDEVEAPGPEEPARAVPAPSGLPPP
PPPLPAPADQTQPPHGEASVAGEESTAGIPEAAPAAGEASSAAAAAAVLLMLDLCAVSNAALARVLRQLS
DVARHACSLFQELESDIQLTHRRVWALQGKLGGVQRVLSTLDPKQEAVPVSNLDIESKLSVYYRAPWHQQ
RNIFLPATRPPCVEELHRHARQSLQALRREHRSRSDRREQRAAAPLSIAAPPLPAYPPAHSQRRREFKDR
HFLTSHPPEDEDTDVMLGQRPKNPIHNIPSTLDKQTNWSKALPLPTPEEKMKQDAQVISSCIIPINVTGV
GFDREASIRCSLVHSQSVLQRRRKLRRRKTISGIPRRVQQEIDSDESPVARERNVIVHTNPDPSNTVNRI
SGTRDSECQTEDILIAAPSRRRIRAQRGQSIAASLSHSAGNISALADKGDTMFTPAVSSRTRSRSLPREG
NRGGDAEPKVGAKPSAYEEGESFVGDHERTPNDFSEAPSSPSAQDHQPTLGLACSQHLHSPQHKLSERGR
SRLSRMAADSGSCDISSNSDTFGSPIHCISTAGVLLSSHMDQKDDHQSSSGNWSGSSSTCPSQTSETIPP
AASPPLTGSSHCDSELSLNTAPHANEDASVFVTEQYNDHLDKVRGHRANSFTSTVADLLDDPNNSNTSDS
EWNYLHHHHDASCRQDFSPERPKADSLGCPSFTSMATYDSFLEKSPSDKADTSSHFSVDTEGYYTSMHFD
CGLKGNKSYVCHYAALGPENGQGVGASPGLPDCAWQDYLDHKRQGRPSISFRKPKAKPTPPKRSSSLRKS
DGNADISEKKEPKISSGQHLPHSSREMKLPLDFANTPSRMENANLPTKQEPSWINQSEQGIKEPQLDASD
IPPFKDEVAESTHYADLWLLNDLKTNDPYRSLSNSSTATGTTVIECIKSPESSESQTSQSESRATTPSLP
SVDNEFKLASPEKLAGLASPSSGYSSQSETPTSSFPTAFFSGPLSPGGSKRKPKVPERKSSLQQPSLKDG
TISLSKDLELPIIPPTHLDLSALHNVLNKPFHHRHPLHVFTHNKQNTVGETLRSNPPPSLAITPTILKSV
NLRSINKSEEVKQKEENNTDLPYLEESTLTTAALSPSKIRPHTANKSVSRQYSTEDTILSFLDSSAVEMG
PDKLHLEKNSTFDVKNRCDPETITSAGSSLLDSNVTKDQVRTETEPIPENTPTKNCAFPTEGFQRVSAAR
PNDLDGKIIQYGPGPDETLEQVQKAPSAGLEEVAQPESVDVITSQSDSPTRATDVSNQFKHQFVMSRHHD
KVPGTISYESEITSVNSFPEKCSKQENIASGISAKSASDNSKAEETQGNVDEASLKESSPSDDSIISPLS
EDSQAEAEGVFVSPNKPRTTEDLFAVIHRSKRKVLGRKDSGDMSVRSKSRAPLSSSSSSASSITSPSSNV
TTPNSQRSPGLIYRNAKKSNTSNEEFKLLLLKKGSRSDSSYRMSATEILKSPILPKPPGELTAESPQSTD
DAHQGSQGAEALSPLSPCSPRVNAEGFSSKSFATSASARVGRSRAPPAASSSRYSVRCRLYNTPMQAISE
GETENSDGSPHDDRSSQSST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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