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Report for CCDS44910.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44910.1 Public Homo sapiens 12 ZNF385A 24 110 108 CCDS HistoryNCBI Gene:25946Re-query CCDS DB by CCDS ID:44910.1Re-query CCDS DB by GeneID:25946See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44910.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000352268.10 ENSP00000293385.9 Accepted alive Link to Ensembl Transcript Viewer:ENST00000352268.10Link to Ensembl Protein Viewer:ENSP00000293385.9Re-query CCDS DB by Nucleotide ID:ENST00000352268Re-query CCDS DB by Protein ID:ENSP00000293385
Original member Current member NCBI NM_001130968.3 NP_001124440.1 Accepted alive Link to Nucleotide Sequence:NM_001130968.3Link to Protein Sequence:NP_001124440.1Re-query CCDS DB by Nucleotide ID:NM_001130968Re-query CCDS DB by Protein ID:NP_001124440Link to BLAST:NP_001124440.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001124440.1 305 Q96PM9-3 305 100% 0 0

Chromosomal Locations for CCDS 44910.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 54370256 54370486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54370626 54370721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54370927 54371096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54373973 54374135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54375844 54375954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54384428 54384564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54391235 54391244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGATCCTCGGCAGCCTGAGCCGGGCAGGGCCCCTGCCTCTGCTACGGCAGCCCCCGATCATGCAGCCCC
CACTGGACCTCAAGCAGATCCTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGCCTCTTCAGCAACTA
CAGCACCATGGACCCTGTGCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACCCTTGCTCAAGACCAAG
CGGCCCGTCATTTCCTGTAATATCTGTCAAATCCGCTTCAATTCTCAGAGCCAGGCTGAGGCGCACTACA
AAGGTAATCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTGCCAAGACCAGAGGCAGGGAGCCTGGCGT
CCGAGAACCTGGAGACCCAGCTCCCCCAGGCAGCACCCCAACAAATGGGGATGGTGTAGCACCCCGTCCA
GGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCTCGGGCCCATCAAAGCTTACCCTCGGCTGG
GGCCTCCCACCCCGGGGGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCACTGTGAGATCTGCAATGT
CAAGGTCAACTCGGAGGTCCAACTGAAACAGCACATCTCCAGCCGGCGGCACCGAGACGGCGTGGCCGGG
AAGCCCAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGGCGCCGGGGAGCTGGCGGGCACGCTGACTT
TCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGGCCTGCTCCCCAGCCCCCTGGCGGTGGCTGCAGTGAT
GGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTTCTCCAGGGACCGCCG
ATCACTCACCCTCTGCTTCACCCGGCCCCCGGACCCATCCGAACTGCGCACGGACCCATCCTCTTCTCCC
CGTACTGA

Translation (305 aa):
MILGSLSRAGPLPLLRQPPIMQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPLLKTK
RPVISCNICQIRFNSQSQAEAHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDGVAPRP
GTKHKTILEARSGLGPIKAYPRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAG
KPNPLLSRHKKSRGAGELAGTLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPP
ITHPLLHPAPGPIRTAHGPILFSPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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