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Report for CCDS60432.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60432.1 Public Homo sapiens 1 MIXL1 24 110 108 CCDS HistoryNCBI Gene:83881Re-query CCDS DB by CCDS ID:60432.1Re-query CCDS DB by GeneID:83881See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 60432.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000542034.5 ENSP00000442439.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542034.5Link to Ensembl Protein Viewer:ENSP00000442439.1Re-query CCDS DB by Nucleotide ID:ENST00000542034Re-query CCDS DB by Protein ID:ENSP00000442439
Original member Current member NCBI NM_001282402.2 NP_001269331.1 Accepted alive Link to Nucleotide Sequence:NM_001282402.2Link to Protein Sequence:NP_001269331.1Re-query CCDS DB by Nucleotide ID:NM_001282402Re-query CCDS DB by Protein ID:NP_001269331Link to BLAST:NP_001269331.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269331.1 240 Q9H2W2-2 240 100% 0 0

Chromosomal Locations for CCDS 60432.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 226223682 226224074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 226225483 226225812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (723 nt):
ATGGCCACAGCCGAGTCCCGTGCGCTCCAGTTTGCCGAGGGCGCCGCGTTTCCAGCGTACCGGGCCCCCC
ACGCCGGCGGGGCGCTCCTGCCGCCCCCGAGCCCTGCGGCAGCCCTGCTCCCTGCGCCGCCCGCGGGCCC
CGGCCCAGCGACCTTTGCGGGCTTCCTCGGCCGGGACCCCGGGCCGGCCCCGCCGCCCCCCGCCAGCCTG
GGCTCGCCTGCGCCCCCCAAAGGCGCGGCCGCCCCGTCGGCGTCGCAGCGCCGCAAGCGCACGTCTTTCA
GCGCCGAACAGCTGCAGCTGCTGGAGCTCGTCTTCCGCCGGACCCGGTACCCCGACATCCACTTGCGCGA
GCGCCTGGCCGCGCTCACCCTGCTCCCCGAGTCCAGGATCCAGCTTTTATTTTCTCCCCTCTTCCAGGTA
TGGTTCCAGAACAGGCGTGCCAAGTCTCGGCGTCAGAGTGGGAAATCCTTCCAACCTTTGGCTAGGCCGG
AGATTATCCTCAACCACTGTGCTCCTGGAACTGAAACGAAATGTCTGAAGCCCCAGCTGCCTCTTGAGGT
AGATGTGAACTGCCTGCCCGAACCAAACGGGGTTGGAGGGGGCATCTCTGACTCTAGCTCCCAAGGTCAG
AATTTTGAAACCTGTTCCCCTCTCTCTGAAGACATTGGTTCAAAGCTGGACTCATGGGAGGAACACATCT
TTTCTGCCTTTGGTAACTTTTGA

Translation (240 aa):
MATAESRALQFAEGAAFPAYRAPHAGGALLPPPSPAAALLPAPPAGPGPATFAGFLGRDPGPAPPPPASL
GSPAPPKGAAAPSASQRRKRTSFSAEQLQLLELVFRRTRYPDIHLRERLAALTLLPESRIQLLFSPLFQV
WFQNRRAKSRRQSGKSFQPLARPEIILNHCAPGTETKCLKPQLPLEVDVNCLPEPNGVGGGISDSSSQGQ
NFETCSPLSEDIGSKLDSWEEHIFSAFGNF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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