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Report for CCDS14607.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
14607.1 |
Public |
Homo sapiens |
X |
STAG2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:10735](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:14607.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:10735](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome X in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 14607.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000371144.7 |
ENSP00000360186.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000371144.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000360186.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000371144](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000360186](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000371157.7 |
ENSP00000360199.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000371157.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000360199.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000371157](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000360199](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000371160.5 |
ENSP00000360202.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000371160.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000360202.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000371160](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000360202](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001042751.2 |
NP_001036216.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001042751.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001036216.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001042751](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001036216](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001036216.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001282418.2 |
NP_001269347.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001282418.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001269347.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001282418](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001269347](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001269347.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375373.1 |
NP_001362302.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375373.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362302.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375373](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362302](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362302.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375374.1 |
NP_001362303.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375374.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362303.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375374](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362303](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362303.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375375.1 |
NP_001362304.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375375.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362304.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375375](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362304](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362304.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375376.1 |
NP_001362305.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375376.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362305.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375376](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362305](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362305.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001375377.1 |
NP_001362306.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001375377.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001362306.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001375377](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001362306](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001362306.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_006603.5 |
NP_006594.3 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_006603.5](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_006594.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_006603](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_006594](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_006594.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 14607.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3696 nt): ATGATAGCAGCTCCAGAAATACCAACTGATTTTAATCTACTACAGGAGTCAGAAACACATTTTTCTTCTG ACACAGATTTTGAAGATATCGAAGGAAAAAACCAAAAGCAAGGCAAAGGCAAAACTTGTAAAAAAGGCAA AAAGGGCCCAGCAGAAAAGGGCAAAGGTGGAAATGGAGGAGGAAAACCTCCTTCTGGTCCAAACCGAATG AATGGTCATCACCAACAGAATGGAGTGGAAAACATGATGTTGTTTGAAGTTGTTAAAATGGGCAAGAGTG CTATGCAGTCGGTGGTAGATGATTGGATAGAATCATACAAGCATGACCGAGATATAGCACTTCTTGACCT TATCAACTTTTTTATTCAGTGTTCAGGCTGTAAAGGAGTTGTCACAGCAGAAATGTTTAGACATATGCAG AACTCTGAGATAATTCGAAAAATGACTGAAGAATTCGATGAGGATAGTGGAGATTATCCACTTACCATGG CTGGTCCTCAGTGGAAGAAGTTCAAATCCAGTTTTTGTGAATTCATTGGCGTGTTAGTACGGCAATGTCA ATATAGTATCATATATGATGAGTATATGATGGATACAGTCATTTCACTTCTTACAGGATTGTCTGACTCA CAAGTCAGAGCATTTCGACATACAAGCACCCTGGCAGCTATGAAGTTGATGACAGCTTTGGTGAATGTGG CACTAAATCTTAGCATTAATATGGATAATACACAAAGACAATATGAAGCAGAACGGAATAAAATGATTGG AAAACGAGCCAATGAGAGGCTAGAACTCCTGCTACAAAAGCGGAAAGAGCTTCAGGAAAATCAAGATGAA ATAGAAAATATGATGAATGCAATATTTAAAGGAGTGTTTGTACATAGATACCGTGATGCGATAGCTGAAA TTCGAGCTATTTGCATTGAAGAGATTGGCATTTGGATGAAGATGTATAGTGATGCCTTTCTTAATGACAG TTATTTAAAATATGTTGGTTGGACTATGCATGATAAGCAAGGTGAAGTAAGACTCAAATGTCTTACTGCT CTACAAGGGCTTTATTATAACAAAGAGCTTAATTCCAAACTGGAACTTTTTACCAGTCGGTTCAAGGATA GAATTGTGTCTATGACCCTTGACAAAGAATATGATGTTGCAGTACAAGCAATAAAATTACTCACTCTTGT TTTACAGAGTAGTGAAGAAGTTCTCACTGCAGAAGATTGTGAAAATGTCTATCATCTGGTTTATTCAGCT CACCGGCCAGTAGCAGTAGCAGCTGGAGAATTTCTCTACAAAAAGCTCTTCAGTCGTAGAGATCCAGAGG AGGATGGAATGATGAAAAGAAGAGGAAGACAAGGTCCAAATGCCAACCTTGTTAAGACATTGGTTTTTTT CTTTCTAGAAAGTGAGTTACATGAGCATGCAGCATACCTTGTGGATAGCATGTGGGACTGTGCTACTGAG CTGCTGAAAGACTGGGAATGTATGAATAGCTTGTTACTGGAAGAGCCACTTAGTGGAGAGGAAGCACTAA CAGATAGGCAAGAGAGTGCTCTGATTGAAATAATGCTTTGTACCATTAGACAAGCGGCTGAATGTCATCC TCCCGTGGGAAGAGGGACAGGAAAAAGGGTGCTTACAGCAAAGGAGAAGAAGACACAGTTGGATGATAGG ACAAAAATCACTGAGCTTTTTGCCGTGGCCCTTCCTCAGTTATTAGCAAAATACTCTGTAGATGCAGAAA AGGTGACTAACTTGTTGCAGTTGCCTCAGTACTTTGATTTGGAAATATATACCACTGGACGATTAGAAAA GCATTTGGATGCCTTATTGCGACAGATCCGGAATATTGTAGAGAAGCACACAGATACAGATGTTTTGGAA GCATGTTCTAAAACTTACCATGCACTCTGTAATGAAGAGTTCACAATCTTCAACAGAGTAGATATTTCAA GAAGTCAACTGATAGATGAATTGGCAGATAAATTTAACCGGCTTCTTGAAGATTTTCTGCAAGAGGGTGA AGAACCTGATGAAGATGATGCATATCAGGTATTGTCAACATTGAAGAGGATCACTGCTTTTCATAATGCC CATGACCTTTCAAAGTGGGATTTATTTGCTTGTAATTACAAACTCTTGAAAACTGGAATCGAAAATGGAG ACATGCCTGAGCAGATTGTTATTCACGCACTGCAGTGTACTCACTATGTAATCCTTTGGCAACTTGCTAA GATAACTGAAAGCAGCTCTACAAAGGAGGACTTGCTGCGTTTAAAGAAACAAATGAGAGTATTTTGTCAG ATATGTCAACATTACCTGACCAACGTGAATACTACTGTTAAGGAACAGGCCTTCACTATTCTGTGTGATA TTTTGATGATCTTCAGCCATCAGATTATGTCAGGAGGGCGTGACATGTTAGAGCCATTAGTGTATACCCC TGATTCTTCATTGCAGTCTGAGTTGCTCAGCTTTATTTTGGATCATGTCTTCATTGAACAGGATGATGAT AATAATAGTGCAGATGGTCAGCAAGAGGATGAAGCCAGTAAAATTGAAGCTCTGCACAAGAGAAGAAATT TACTTGCAGCATTTTGTAAGCTAATTGTATATACTGTGGTGGAGATGAATACAGCTGCAGATATCTTCAA ACAGTATATGAAGTATTATAATGACTATGGAGATATCATCAAAGAAACAATGAGTAAAACAAGGCAGATA GACAAAATTCAGTGTGCTAAGACCCTTATTCTCAGTCTGCAACAGCTTTTTAATGAAATGATACAAGAAA ATGGCTATAATTTTGATAGATCATCCTCTACATTTAGTGGCATAAAAGAACTTGCTCGACGTTTTGCTTT AACTTTTGGACTTGATCAGTTGAAAACAAGAGAAGCCATTGCCATGCTACACAAAGATGGCATAGAATTT GCTTTTAAAGAGCCTAATCCGCAAGGGGAGAGCCATCCACCTTTAAATTTGGCATTTCTTGATATTCTGA GTGAATTTTCTTCTAAACTACTTCGACAAGACAAAAGAACAGTGTATGTTTACTTGGAAAAGTTCATGAC CTTTCAGATGTCACTCCGAAGAGAGGATGTGTGGCTTCCACTGATGTCTTACCGAAATTCTTTGCTAGCT GGTGGTGATGATGACACCATGTCAGTCATTAGTGGAATCAGCAGCCGGGGGTCAACAGTACGGAGTAAAA AATCAAAACCATCTACAGGAAAACGGAAAGTGGTTGAGGGCATGCAGCTTTCACTCACTGAAGAAAGTAG TAGTAGTGACAGTATGTGGTTAAGCAGAGAACAAACACTGCACACCCCTGTTATGATGCAGACACCACAA CTCACCTCCACTATTATGAGAGAGCCCAAAAGATTACGGCCTGAGGATAGCTTCATGAGTGTTTATCCAA TGCAGACTGAACATCATCAAACACCTCTTGATTATAATCGGCGTGGCACAAGCCTAATGGAAGATGATGA AGAGCCAATTGTGGAAGATGTTATGATGTCCTCAGAAGGGAGGATTGAGGATCTTAATGAGGGAATGGAT TTTGACACCATGGATATAGATTTGCCACCATCAAAGAACAGACGAGAGAGAACAGAACTGAAGCCTGATT TCTTTGATCCAGCTTCAATTATGGATGAATCAGTTCTTGGAGTGTCAATGTTTTAA
Translation (1231 aa): MIAAPEIPTDFNLLQESETHFSSDTDFEDIEGKNQKQGKGKTCKKGKKGPAEKGKGGNGGGKPPSGPNRM NGHHQQNGVENMMLFEVVKMGKSAMQSVVDDWIESYKHDRDIALLDLINFFIQCSGCKGVVTAEMFRHMQ NSEIIRKMTEEFDEDSGDYPLTMAGPQWKKFKSSFCEFIGVLVRQCQYSIIYDEYMMDTVISLLTGLSDS QVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQRQYEAERNKMIGKRANERLELLLQKRKELQENQDE IENMMNAIFKGVFVHRYRDAIAEIRAICIEEIGIWMKMYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTA LQGLYYNKELNSKLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSEEVLTAEDCENVYHLVYSA HRPVAVAAGEFLYKKLFSRRDPEEDGMMKRRGRQGPNANLVKTLVFFFLESELHEHAAYLVDSMWDCATE LLKDWECMNSLLLEEPLSGEEALTDRQESALIEIMLCTIRQAAECHPPVGRGTGKRVLTAKEKKTQLDDR TKITELFAVALPQLLAKYSVDAEKVTNLLQLPQYFDLEIYTTGRLEKHLDALLRQIRNIVEKHTDTDVLE ACSKTYHALCNEEFTIFNRVDISRSQLIDELADKFNRLLEDFLQEGEEPDEDDAYQVLSTLKRITAFHNA HDLSKWDLFACNYKLLKTGIENGDMPEQIVIHALQCTHYVILWQLAKITESSSTKEDLLRLKKQMRVFCQ ICQHYLTNVNTTVKEQAFTILCDILMIFSHQIMSGGRDMLEPLVYTPDSSLQSELLSFILDHVFIEQDDD NNSADGQQEDEASKIEALHKRRNLLAAFCKLIVYTVVEMNTAADIFKQYMKYYNDYGDIIKETMSKTRQI DKIQCAKTLILSLQQLFNEMIQENGYNFDRSSSTFSGIKELARRFALTFGLDQLKTREAIAMLHKDGIEF AFKEPNPQGESHPPLNLAFLDILSEFSSKLLRQDKRTVYVYLEKFMTFQMSLRREDVWLPLMSYRNSLLA GGDDDTMSVISGISSRGSTVRSKKSKPSTGKRKVVEGMQLSLTEESSSSDSMWLSREQTLHTPVMMQTPQ LTSTIMREPKRLRPEDSFMSVYPMQTEHHQTPLDYNRRGTSLMEDDEEPIVEDVMMSSEGRIEDLNEGMD FDTMDIDLPPSKNRRERTELKPDFFDPASIMDESVLGVSMF
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