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Report for CCDS53886.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53886.1 Public Homo sapiens 14 HAUS4 24 110 108 CCDS HistoryNCBI Gene:54930Re-query CCDS DB by CCDS ID:53886.1Re-query CCDS DB by GeneID:54930See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53886.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342454.12 ENSP00000342776.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000342454.12Link to Ensembl Protein Viewer:ENSP00000342776.8Re-query CCDS DB by Nucleotide ID:ENST00000342454Re-query CCDS DB by Protein ID:ENSP00000342776
Original member Current member EBI ENST00000555986.5 ENSP00000451018.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555986.5Link to Ensembl Protein Viewer:ENSP00000451018.1Re-query CCDS DB by Nucleotide ID:ENST00000555986Re-query CCDS DB by Protein ID:ENSP00000451018
Original member Current member EBI ENST00000555367.5 ENSP00000452239.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555367.5Link to Ensembl Protein Viewer:ENSP00000452239.1Re-query CCDS DB by Nucleotide ID:ENST00000555367Re-query CCDS DB by Protein ID:ENSP00000452239
Original member Current member NCBI NM_001166270.2 NP_001159742.1 Accepted alive Link to Nucleotide Sequence:NM_001166270.2Link to Protein Sequence:NP_001159742.1Re-query CCDS DB by Nucleotide ID:NM_001166270Re-query CCDS DB by Protein ID:NP_001159742Link to BLAST:NP_001159742.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001159742.1 318 Q9H6D7-4 318 100% 0 0

Chromosomal Locations for CCDS 53886.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 22946525 22946708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22947171 22947239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22947601 22947731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22947868 22948013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22950314 22950410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22952328 22952459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22952541 22952683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22955100 22955154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGGCATCCGGGGATTTCTGCTCACCTGGAGAAGGGATGGAAATACTTCAACAAGTGTGCAGCAAACAAC
TTCCTCCTTGTAACCTGAGTAAAGAGGACCTGTTACAGAACCCATACTTCAGCAAGCTTCTCCTGAATCT
CTCACAGCATGTGGATGAGAGTGGCTTAAGCCTCACCCTAGCAAAGGAGCAGGCTCAGGCATGGAAGGAA
GTTCGACTGCATAAGACAACATGGTTGAGGTCTGAGATTTTACACAGAGTCATTCAAGAGTTGCTTGTGG
ACTACTATGTGAAGATACAAGACACAAATGTAACTTCTGAGGACAAAAAGGATTTTGTGTGGATGAGGGC
TCGGCTACAGCAAGAAGTAGAGGAGCAGCTCAAAAAGAAATGTTTCACTCTGCTCTGCTACTATGATCCC
AATTCAGATGCTGACAGTGAAACCGTGAAGGCAGCAAAGGTGTGGAAACTCGCAGAGGTCCTGGTGGGTG
AGCAGCAGCAGTGCCAGGATGCCAAGAGCCAGCAGAAGGAGCAGATGTTGCTGCTGGAGAAGAAGAGTGC
TGCTTACTCCCAGGTGCTTCTCCGCTGCCTCACTTTGCTGCAGAGGCTTCTTCAAGAACACCGGCTGAAG
ACTCAATCCGAGCTAGACCGCATCAATGCCCAGTACCTGGAAGTCAAGTGCGGTGCTATGATCCTTAAGC
TGAGGATGGAGGAGCTAAAGATTTTGTCCGACACTTACACTGTTGAGAAAGTGGAAGTTCATCGTCTGAT
TAGGGACCGTTTGGAGGGAGCCATTCACCTACAGGAGCAGGACATGGAGAACTCAAGACAGGTCCTGAAC
TCCTATGAGGTCCTTGGGGAGGAGTTTGACAGGCTGGTGAAAGAGTACACCGTACTCAAGCAGGCAACAG
AGAACAAGCGGTGGGCCCTCCAGGAGTTCAGCAAGGTCTACCGTTGA

Translation (318 aa):
MASGDFCSPGEGMEILQQVCSKQLPPCNLSKEDLLQNPYFSKLLLNLSQHVDESGLSLTLAKEQAQAWKE
VRLHKTTWLRSEILHRVIQELLVDYYVKIQDTNVTSEDKKDFVWMRARLQQEVEEQLKKKCFTLLCYYDP
NSDADSETVKAAKVWKLAEVLVGEQQQCQDAKSQQKEQMLLLEKKSAAYSQVLLRCLTLLQRLLQEHRLK
TQSELDRINAQYLEVKCGAMILKLRMEELKILSDTYTVEKVEVHRLIRDRLEGAIHLQEQDMENSRQVLN
SYEVLGEEFDRLVKEYTVLKQATENKRWALQEFSKVYR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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