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Report for CCDS41874.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41874.1 Public Homo sapiens 13 MTUS2 24 110 108 CCDS HistoryNCBI Gene:23281Re-query CCDS DB by CCDS ID:41874.1Re-query CCDS DB by GeneID:23281See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41874.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380808.6 ENSP00000370186.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000380808.6Link to Ensembl Protein Viewer:ENSP00000370186.2Re-query CCDS DB by Nucleotide ID:ENST00000380808Re-query CCDS DB by Protein ID:ENSP00000370186
Original member Current member NCBI NM_015233.6 NP_056048.1 Accepted alive Link to Nucleotide Sequence:NM_015233.6Link to Protein Sequence:NP_056048.1Re-query CCDS DB by Nucleotide ID:NM_015233Re-query CCDS DB by Protein ID:NP_056048Link to BLAST:NP_056048.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056048.1 348 Q5JR59-3 348 100% 0 0

Chromosomal Locations for CCDS 41874.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 29428843 29428896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 29439983 29440049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 29480150 29480364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 29487900 29488005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 29492646 29492719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 29497238 29497336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 29498418 29498537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 29501097 29501194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 29502993 29503206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1047 nt):
ATGGGCCATTGCTGCTGCAAGCCTTATAACTGCCTTCAGTGCCTGGACAAGACGAATGAAAGTGCCCTTG
TGAAAGAAAAAGAGCTGTCAATCGAACTTGCAAACATCAGGGATGAAGTTGCCTTCCATACAGCAAAGTG
CGAGAAACTACAAAAGGAGAAGGAGGAGCTGGAGAGGCGGTTCGAGGACGAGGTGAAGAGGCTGGGCTGG
CAGCAGCAGGCCGAGCTCCAGGAGCTGGAGGAGCGGCTGCAGCTGCAATTCGAGGCGGAAATGGCGCGCC
TGCAGGAGGAGCACGGTGACCAGCTGCTGAGCATCCGGTGTCAACACCAGGAGCAGGTGGAAGATCTCAC
CGCCAGCCATGATGCTGCTCTCCTAGAGATGGAAAATAACCACACAGTTGCCATCACAATCCTGCAGGAT
GACCACGACCACAAAGTCCAAGAATTGATGTCCACTCATGAGCTTGAAAAGAAAGAATTGGAAGAAAATT
TTGAAAAACTGCGGCTGTCATTGCAGGACCAGGTGGACACGCTGACCTTCCAGAGCCAGTCTCTGCGGGA
CAGAGCCCGCCGCTTCGAAGAGGCCTTGAGGAAGAACACAGAGGAGCAGCTGGAGATTGCATTGGCTCCT
TATCAGCACTTGGAAGAAGACATGAAGAGTCTGAAGCAGGTATTAGAAATGAAGAATCAGCAAATACACG
AGCAAGAAAAGAAGATTCTTGAGCTGGAAAAGCTGGCAGAAAAGAACATTATCCTAGAAGAAAAGATCCA
GGTTCTCCAACAGCAGAACGAAGACCTCAAAGCAAGGATTGACCAAAACACAGTTGTCACCAGACAGCTG
TCGGAGGAAAATGCTAACCTCCAGGAATATGTTGAGAAGGAAACCCAGGAGAAGAAGAGATTGAGCCGAA
CCAATGAAGAGCTGCTTTGGAAGCTCCAAACTGGGGACCCGACCAGTCCGATTAAACTCTCGCCCACATC
TCCCGTTTACCGCGGCTCCTCCTCGGGGCCCTCCTCTCCGGCCAGAGTCAGCACAACACCCAGATGA

Translation (348 aa):
MGHCCCKPYNCLQCLDKTNESALVKEKELSIELANIRDEVAFHTAKCEKLQKEKEELERRFEDEVKRLGW
QQQAELQELEERLQLQFEAEMARLQEEHGDQLLSIRCQHQEQVEDLTASHDAALLEMENNHTVAITILQD
DHDHKVQELMSTHELEKKELEENFEKLRLSLQDQVDTLTFQSQSLRDRARRFEEALRKNTEEQLEIALAP
YQHLEEDMKSLKQVLEMKNQQIHEQEKKILELEKLAEKNIILEEKIQVLQQQNEDLKARIDQNTVVTRQL
SEENANLQEYVEKETQEKKRLSRTNEELLWKLQTGDPTSPIKLSPTSPVYRGSSSGPSSPARVSTTPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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