CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
![](/corehtml/transparent.gif) |
Report for CCDS11614.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
11614.1 |
Public |
Homo sapiens |
17 |
PRR11 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:55771](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:11614.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:55771](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 17 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 11614.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000262293.9 |
ENSP00000262293.5 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000262293.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000262293.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000262293](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000262293](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000580177.5 |
ENSP00000463733.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000580177.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000463733.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000580177](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000463733](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000578542.5 |
ENSP00000464171.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000578542.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000464171.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000578542](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000464171](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000614081.1 |
ENSP00000481852.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000614081.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000481852.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000614081](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000481852](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_018304.4 |
NP_060774.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_018304.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_060774.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_018304](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_060774](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_060774.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_060774.2 |
360 |
Q96HE9 |
360 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 11614.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1083 nt): ATGCCCAAGTTCAAACAACGAAGACGAAAGCTAAAAGCCAAAGCCGAAAGATTATTCAAAAAAAAAGAAG CCTCTCACTTTCAGTCCAAGCTAATTACACCTCCTCCTCCACCACCCTCACCAGAAAGAGTCGGTATTTC TTCAATAGATATATCTCAAAGCAGAAGCTGGCTAACATCATCCTGGAACTTCAATTTTCCTAACATCAGA GATGCAATAAAACTTTGGACAAATAGAGTATGGTCTATATACAGCTGGTGCCAGAACTGCATAACCCAGA GTTTAGAAGTATTGAAAGACACCATCTTTCCATCTCGTATCTGCCACCGAGAACTTTACAGTGTAAAACA ACAGTTTTGCATTTTGGAAAGTAAATTATGCAAGCTCCAGGAAGCACTGAAGACCATCTCAGAAAGTTCT TCCTGTCCAAGCTGTGGTCAAACATGTCACATGAGTGGTAAACTTACAAATGTGCCTGCCTGCGTTCTGA TCACCCCTGGAGACTCCAAAGCTGTGCTTCCTCCCACACTGCCACAGCCAGCCAGCCATTTTCCTCCTCC TCCTCCACCTCCACCTCTGCCACCTCCTCCACCACCACTAGCACCTGTGTTGCTCAGAAAACCCAGTCTC GCTAAAGCACTTCAGGCTGGACCATTAAAAAAAGATGGACCCATGCAGATAACAGTTAAAGATCTGCTGA CTGTAAAATTAAAGAAGACACAGAGTTTAGATGAAAAGAGGAAGCTTATACCATCGCCGAAAGCACGGAA TCCACTAGTTACCGTCTCTGACTTGCAGCATGTTACCCTGAAACCTAACTCCAAAGTGTTATCGACTCGA GTTACAAACGTCTTAATCACTCCTGGAAAAAGTCAGATGGATCTGCGGAAACTGCTTAGAAAAGTCGATG TAGAGAGGAGCCCAGGTGGAACCCCTCTTACCAATAAGGAAAATATGGAAACAGGAACAGGACTGACTCC AGTGATGACGCAGGCCTTAAGGAGAAAGTTTCAGCTGGCTCACCCTAGAAGCCCAACTCCAACTCTGCCA CTTTCTACAAGCAGCTTTGATGAACAAAACTGA
Translation (360 aa): MPKFKQRRRKLKAKAERLFKKKEASHFQSKLITPPPPPPSPERVGISSIDISQSRSWLTSSWNFNFPNIR DAIKLWTNRVWSIYSWCQNCITQSLEVLKDTIFPSRICHRELYSVKQQFCILESKLCKLQEALKTISESS SCPSCGQTCHMSGKLTNVPACVLITPGDSKAVLPPTLPQPASHFPPPPPPPPLPPPPPPLAPVLLRKPSL AKALQAGPLKKDGPMQITVKDLLTVKLKKTQSLDEKRKLIPSPKARNPLVTVSDLQHVTLKPNSKVLSTR VTNVLITPGKSQMDLRKLLRKVDVERSPGGTPLTNKENMETGTGLTPVMTQALRRKFQLAHPRSPTPTLP LSTSSFDEQN
|