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Report for CCDS44618.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44618.1 Public Homo sapiens 11 TMEM132A 24 110 108 CCDS HistoryNCBI Gene:54972Re-query CCDS DB by CCDS ID:44618.1Re-query CCDS DB by GeneID:54972See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44618.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000453848.7 ENSP00000405823.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000453848.7Link to Ensembl Protein Viewer:ENSP00000405823.2Re-query CCDS DB by Nucleotide ID:ENST00000453848Re-query CCDS DB by Protein ID:ENSP00000405823
Original member Current member NCBI NM_178031.3 NP_821174.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178031.3Link to Protein Sequence:NP_821174.1Re-query CCDS DB by Nucleotide ID:NM_178031Re-query CCDS DB by Protein ID:NP_821174Link to BLAST:NP_821174.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_821174.1 1023 Q24JP5-1 1023 100% 0 0

Chromosomal Locations for CCDS 44618.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 60924634 60924733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60927204 60927418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60927641 60927859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60928629 60928960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60930510 60930659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60931689 60931884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60931984 60932127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60933542 60933744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60934488 60934764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60935252 60935443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60935864 60936907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3072 nt):
ATGTGCGCGCGGATGGCCGGTCGCACAACAGCGGCCCCTCGGGGGCCCTACGGCCCCTGGCTCTGCCTCC
TGGTGGCCCTCGCCCTGGACGTCGTGAGAGTGGACTGTGGCCAGGCTCCCCTGGACCCTGTCTACCTGCC
GGCAGCCCTGGAGCTCCTAGACGCCCCTGAACACTTCCGTGTGCAGCAGGTGGGCCACTACCCACCTGCC
AACTCCTCTCTGAGCTCCCGATCTGAGACCTTTCTGCTCCTACAGCCCTGGCCCAGGGCCCAGCCACTTC
TCCGGGCCTCCTACCCACCTTTTGCCACTCAGCAGGTGGTCCCCCCTCGAGTCACTGAGCCCCACCAACG
GCCAGTCCCATGGGACGTGCGGGCCGTTTCAGTGGAAGCGGCTGTGACTCCAGCAGAGCCCTACGCCCGG
GTTCTCTTCCACCTCAAAGGGCAGGATTGGCCACCAGGGTCTGGCAGCCTGCCCTGTGCCCGGCTCCATG
CCACACACCCTGCCGGCACTGCTCACCAAGCCTGCCGCTTCCAGCCATCCCTGGGCGCCTGCGTGGTGGA
GCTGGAGCTTCCCTCGCACTGGTTCTCACAGGCCTCCACCACACGGGCCGAGCTGGCCTACACGCTTGAG
CCTGCAGCTGAGGGCCCTGGGGGCTGTGGCTCCGGCGAGGAGAACGACCCTGGGGAGCAGGCCCTCCCAG
TGGGGGGTGTGGAGCTGCGCCCAGCAGACCCCCCGCAGTACCAGGAGGTACCTCTGGACGAGGCTGTGAC
TCTGCGGGTGCCTGACATGCCAGTGCGGCCCGGCCAGCTCTTTAGTGCTACCCTCCTGCTTCGGCACAAC
TTCACAGCCAGCCTCCTGACCCTGCGGATCAAGGTGAAGAAGGGGCTGCATGTGACAGCCGCCCGCCCAG
CCCAGCCCACACTCTGGACTGCCAAGCTGGACCGCTTCAAGGGCTCCAGGCACCACACCACCCTCATCAC
CTGCCACCGTGCTGGGCTCACAGAGCCAGATTCCAGTCCCCTTGAACTGTCTGAGTTCCTATGGGTGGAC
TTTGTGGTGGAGAATAGCACTGGTGGGGGCGTAGCGGTCACTCGCCCCGTCACGTGGCAGCTGGAGTACC
CAGGCCAGGCCCCTGAAGCAGAGAAGGACAAAATGGTGTGGGAAATCCTGGTGTCTGAGCGGGACATCAG
AGCCCTTATCCCACTGGCCAAGGCTGAGGAGCTGGTGAATACAGCACCACTGACTGGAGTGCCCCAGCAT
GTCCCCGTGCGCCTTGTCACTGTGGACGGCGGGGGGGCCTTGGTGGAGGTGACAGAGCATGTCGGCTGCG
AGTCTGCCAACACACAGGTCCTGCAGGTGTCTGAGGCCTGTGATGCCGTGTTCGTGGCTGGCAAGGAGAG
CCGGGGCGCCCGGGGGGTGCGAGTGGACTTCTGGTGGCGCCGGCTCCGCGCCTCGCTGCGGCTGACCGTG
TGGGCCCCCCTGCTACCGCTGCGTATCGAGCTCACCGACACCACCCTCGAGCAGGTCCGCGGCTGGAGGG
TACCTGGCCCTGCTGAAGGGCCTGCGGAACCCGCTGCAGAGGCGTCGGATGAGGCCGAGCGGCGCGCCCG
TGGCTGCCACCTGCAGTACCAGCGGGCCGGTGTGCGCTTCCTCGCCCCCTTCGCGGCCCACCCGCTGGAC
GGCGGCCGCCGCCTCACGCACCTGCTTGGCCCCGACTGGCTGCTAGACGTGTCCCACCTCGTGGCGCCAC
ACGCCCGCGTGCTGGACTCGCGTGTAGCCTCTCTGGAGGGTGGCCGTGTCGTGGTGGGCCGGGAGCCCGG
TGTCACCTCCATTGAGGTGCGTTCCCCACTGTCTGACTCCATCCTGGGGGAGCAGGCGCTGGCTGTGACG
GACGACAAGGTCTCAGTGCTGGAGCTGAGGGTGCAGCCAGTGATGGGCATCTCGCTGACCTTGAGCCGGG
GCACTGCCCACCCCGGGGAGGTCACAGCTACGTGCTGGGCACAGTCAGCCCTTCCCGCCCCAAAGCAGGA
GGTGGCCCTCTCCCTATGGCTGTCCTTCTCTGATCACACTGTGGCCCCAGCTGAGCTCTACGACCGCCGT
GACCTGGGACTGTCCGTCTCAGCCGAGGAGCCTGGTGCCATCCTGCCAGCTGAGGAGCAGGGTGCCCAGC
TCGGGGTGGTGGTGAGTGGGGCAGGCGCCGAGGGGCTGCCGCTGCATGTGGCTCTGCACCCGCCCGAGCC
CTGCCGCCGGGGCCGCCACCGTGTGCCTCTGGCCTCTGGCACCGCCTGGCTGGGGCTGCCCCCTGCCTCC
ACTCCAGCCCCTGCTCTCCCATCCAGCCCTGCTTGGAGCCCACCAGCCACAGAAGCCACCATGGGTGGTA
AACGGCAGGTGGCAGGCAGTGTCGGGGGCAACACAGGTGTGAGGGGCAAGTTTGAGCGGGCAGAGGAGGA
GGCCAGGAAGGAGGAGACCGAAGCCAGGGAGGAGGAGGAGGAAGAGGAGGAGGAGATGGTCCCTGCCCCT
CAGCATGTCACTGAGCTAGAGCTGGGCATGTACGCCCTGCTGGGAGTCTTCTGCGTGGCCATCTTCATCT
TCTTGGTCAATGGTGTGGTCTTCGTCCTGCGCTATCAGCGCAAAGAACCTCCCGACAGTGCCACTGACCC
CACCTCCCCCCAGCCCCACAACTGGGTCTGGCTGGGCACTGACCAGGAGGAACTGAGCCGCCAGCTGGAC
CGGCAGTCCCCTGGCCCGCCCAAGGGGGAGGGGAGCTGCCCCTGTGAGAGTGGGGGAGGAGGGGAGGCCC
CTACCCTGGCCCCTGGCCCTCCTGGGGGCACCACCAGCTCCTCAAGCACCCTGGCCCGAAAGGAGGCTGG
GGGGCGGCGGAAGCGAGTAGAGTTTGTGACATTTGCGCCAGCCCCTCCAGCCCAGTCACCTGAGGAGCCT
GTAGGGGCCCCTGCTGTGCAGTCCATCCTTGTGGCAGGCGAGGAGGACATCCGCTGGGTGTGTGAGGACA
TGGGGCTGAAGGACCCTGAGGAGCTTCGCAACTACATGGAGAGGATCCGGGGCAGCTCCTGA

Translation (1023 aa):
MCARMAGRTTAAPRGPYGPWLCLLVALALDVVRVDCGQAPLDPVYLPAALELLDAPEHFRVQQVGHYPPA
NSSLSSRSETFLLLQPWPRAQPLLRASYPPFATQQVVPPRVTEPHQRPVPWDVRAVSVEAAVTPAEPYAR
VLFHLKGQDWPPGSGSLPCARLHATHPAGTAHQACRFQPSLGACVVELELPSHWFSQASTTRAELAYTLE
PAAEGPGGCGSGEENDPGEQALPVGGVELRPADPPQYQEVPLDEAVTLRVPDMPVRPGQLFSATLLLRHN
FTASLLTLRIKVKKGLHVTAARPAQPTLWTAKLDRFKGSRHHTTLITCHRAGLTEPDSSPLELSEFLWVD
FVVENSTGGGVAVTRPVTWQLEYPGQAPEAEKDKMVWEILVSERDIRALIPLAKAEELVNTAPLTGVPQH
VPVRLVTVDGGGALVEVTEHVGCESANTQVLQVSEACDAVFVAGKESRGARGVRVDFWWRRLRASLRLTV
WAPLLPLRIELTDTTLEQVRGWRVPGPAEGPAEPAAEASDEAERRARGCHLQYQRAGVRFLAPFAAHPLD
GGRRLTHLLGPDWLLDVSHLVAPHARVLDSRVASLEGGRVVVGREPGVTSIEVRSPLSDSILGEQALAVT
DDKVSVLELRVQPVMGISLTLSRGTAHPGEVTATCWAQSALPAPKQEVALSLWLSFSDHTVAPAELYDRR
DLGLSVSAEEPGAILPAEEQGAQLGVVVSGAGAEGLPLHVALHPPEPCRRGRHRVPLASGTAWLGLPPAS
TPAPALPSSPAWSPPATEATMGGKRQVAGSVGGNTGVRGKFERAEEEARKEETEAREEEEEEEEEMVPAP
QHVTELELGMYALLGVFCVAIFIFLVNGVVFVLRYQRKEPPDSATDPTSPQPHNWVWLGTDQEELSRQLD
RQSPGPPKGEGSCPCESGGGGEAPTLAPGPPGGTTSSSSTLARKEAGGRRKRVEFVTFAPAPPAQSPEEP
VGAPAVQSILVAGEEDIRWVCEDMGLKDPEELRNYMERIRGSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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