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Report for CCDS8851.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8851.1 Public Homo sapiens 12 MFSD5 24 110 108 CCDS HistoryNCBI Gene:84975Re-query CCDS DB by CCDS ID:8851.1Re-query CCDS DB by GeneID:84975See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8851.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329548.5 ENSP00000332624.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329548.5Link to Ensembl Protein Viewer:ENSP00000332624.5Re-query CCDS DB by Nucleotide ID:ENST00000329548Re-query CCDS DB by Protein ID:ENSP00000332624
Original member Current member NCBI NM_032889.5 NP_116278.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032889.5Link to Protein Sequence:NP_116278.3Re-query CCDS DB by Nucleotide ID:NM_032889Re-query CCDS DB by Protein ID:NP_116278Link to BLAST:NP_116278.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116278.3 450 Q6N075-1 450 100% 0 0

Chromosomal Locations for CCDS 8851.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 53252836 53254188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1353 nt):
ATGCTGGTGACTGCCTACCTTGCTTTTGTAGGCCTCCTGGCCTCCTGCCTGGGGCTGGAACTGTCAAGAT
GCCGGGCTAAACCCCCTGGAAGGGCCTGCAGCAATCCCTCCTTCCTTCGGTTTCAACTGGACTTCTATCA
GGTCTACTTCCTGGCCCTGGCAGCTGATTGGCTTCAGGCCCCCTACCTCTATAAACTCTACCAGCATTAC
TACTTCCTGGAAGGTCAAATTGCCATCCTCTATGTCTGTGGCCTTGCCTCTACAGTCCTCTTTGGCCTAG
TGGCCTCCTCCCTTGTGGATTGGCTGGGTCGCAAGAATTCTTGTGTCCTCTTCTCCCTGACTTACTCACT
ATGCTGCTTAACCAAACTCTCTCAAGACTACTTTGTGCTGCTAGTGGGGCGAGCACTTGGTGGGCTGTCC
ACAGCCCTGCTCTTCTCAGCCTTCGAGGCCTGGTATATCCATGAGCACGTGGAACGGCATGACTTCCCTG
CTGAGTGGATCCCAGCTACCTTTGCTCGAGCTGCCTTCTGGAACCATGTGCTGGCTGTAGTGGCAGGTGT
GGCAGCTGAGGCTGTAGCCAGCTGGATAGGGCTGGGGCCTGTAGCGCCCTTTGTGGCTGCCATCCCTCTC
CTGGCTCTGGCAGGGGCCTTGGCCCTTCGAAACTGGGGGGAGAACTATGACCGGCAGCGTGCCTTCTCAA
GGACCTGTGCTGGAGGCCTGCGCTGCCTCCTGTCGGACCGCCGCGTGCTGCTGTTGGGCACCATACAAGC
TCTATTTGAGAGTGTCATCTTCATCTTTGTCTTCCTCTGGACACCTGTGCTGGACCCACACGGGGCCCCT
CTGGGCATTATCTTCTCCAGCTTCATGGCAGCCAGCCTGCTTGGCTCTTCCCTGTACCGTATCGCCACCT
CCAAGAGGTACCACCTTCAGCCCATGCACCTGCTGTCCCTTGCTGTGCTCATCGTCGTCTTCTCTCTCTT
CATGTTGACTTTCTCTACCAGCCCAGGCCAGGAGAGTCCGGTGGAGTCCTTCATAGCCTTTCTACTTATT
GAGTTGGCTTGTGGATTATACTTTCCCAGCATGAGCTTCCTACGGAGAAAGGTGATCCCTGAGACAGAGC
AGGCTGGTGTACTCAACTGGTTCCGGGTACCTCTGCACTCACTGGCTTGCCTAGGGCTCCTTGTCCTCCA
TGACAGTGATCGAAAAACAGGCACTCGGAATATGTTCAGCATTTGCTCTGCTGTCATGGTGATGGCTCTG
CTGGCAGTGGTGGGACTCTTCACCGTGGTAAGGCATGATGCTGAGCTGCGGGTACCTTCACCTACTGAGG
AGCCCTATGCCCCTGAGCTGTAA

Translation (450 aa):
MLVTAYLAFVGLLASCLGLELSRCRAKPPGRACSNPSFLRFQLDFYQVYFLALAADWLQAPYLYKLYQHY
YFLEGQIAILYVCGLASTVLFGLVASSLVDWLGRKNSCVLFSLTYSLCCLTKLSQDYFVLLVGRALGGLS
TALLFSAFEAWYIHEHVERHDFPAEWIPATFARAAFWNHVLAVVAGVAAEAVASWIGLGPVAPFVAAIPL
LALAGALALRNWGENYDRQRAFSRTCAGGLRCLLSDRRVLLLGTIQALFESVIFIFVFLWTPVLDPHGAP
LGIIFSSFMAASLLGSSLYRIATSKRYHLQPMHLLSLAVLIVVFSLFMLTFSTSPGQESPVESFIAFLLI
ELACGLYFPSMSFLRRKVIPETEQAGVLNWFRVPLHSLACLGLLVLHDSDRKTGTRNMFSICSAVMVMAL
LAVVGLFTVVRHDAELRVPSPTEEPYAPEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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