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Report for CCDS54441.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54441.1 Public Homo sapiens 2 NEU4 24 110 108 CCDS HistoryNCBI Gene:129807Re-query CCDS DB by CCDS ID:54441.1Re-query CCDS DB by GeneID:129807See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54441.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000325935.10 ENSP00000320318.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000325935.10Link to Ensembl Protein Viewer:ENSP00000320318.6Re-query CCDS DB by Nucleotide ID:ENST00000325935Re-query CCDS DB by Protein ID:ENSP00000320318
Original member Current member NCBI NM_001167599.3 NP_001161071.1 Accepted alive Link to Nucleotide Sequence:NM_001167599.3Link to Protein Sequence:NP_001161071.1Re-query CCDS DB by Nucleotide ID:NM_001167599Re-query CCDS DB by Protein ID:NP_001161071Link to BLAST:NP_001161071.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161071.1 497 Q8WWR8-3 497 100% 0 0

Chromosomal Locations for CCDS 54441.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 241811429 241811461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241814479 241814685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241814892 241815147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241816051 241817048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1494 nt):
ATGATGAGCTCTGCAGCCTTCCCAAGGTGGCTGCAGAGCATGGGGGTCCCTCGTACCCCTTCACGGACAG
TGCTCTTCGAGCGGGAGAGGACGGGCCTGACCTACCGCGTGCCCTCGCTGCTCCCCGTGCCCCCCGGGCC
CACCCTGCTGGCCTTTGTGGAGCAGCGGCTCAGCCCTGACGACTCCCACGCCCACCGCCTGGTGCTGAGG
AGGGGCACGCTGGCCGGGGGCTCCGTGCGGTGGGGTGCCCTGCACGTGCTGGGGACAGCAGCCCTGGCGG
AGCACCGGTCCATGAACCCCTGCCCTGTGCACGATGCTGGCACGGGCACCGTCTTCCTCTTCTTCATCGC
GGTGCTGGGCCACACGCCTGAGGCCGTGCAGATCGCCACGGGAAGGAACGCCGCGCGCCTCTGCTGTGTG
GCCAGCCGTGACGCCGGCCTCTCGTGGGGCAGCGCCCGGGACCTCACCGAGGAGGCCATCGGTGGTGCCG
TGCAGGACTGGGCCACATTCGCTGTGGGTCCCGGCCACGGTGTGCAGCTGCCCTCAGGCCGCCTGCTGGT
ACCCGCCTACACCTACCGCGTGGACCGCCGAGAGTGTTTTGGCAAGATCTGCCGGACCAGCCCTCACTCC
TTCGCCTTCTACAGCGATGACCACGGCCGCACCTGGCGCTGTGGAGGCCTCGTGCCCAACCTGCGCTCAG
GCGAGTGCCAGCTGGCAGCGGTGGACGGTGGGCAGGCCGGCAGCTTCCTCTACTGCAATGCCCGGAGCCC
ACTGGGCAGCCGTGTGCAGGCGCTCAGCACTGACGAGGGCACCTCCTTCCTGCCCGCAGAGCGCGTGGCT
TCCCTGCCCGAGACTGCCTGGGGCTGCCAGGGCAGCATCGTGGGCTTCCCAGCCCCCGCCCCCAACAGGC
CACGGGATGACAGTTGGTCAGTGGGCCCCGGGAGTCCCCTCCAGCCTCCACTCCTCGGTCCTGGAGTCCA
CGAACCCCCAGAGGAGGCTGCTGTAGACCCCCGTGGAGGCCAGGTGCCTGGTGGGCCCTTCAGCCGTCTG
CAGCCTCGGGGGGATGGCCCCAGGCAGCCTGGCCCCAGGCCTGGGGTCAGTGGGGATGTGGGGTCCTGGA
CCCTGGCACTCCCCATGCCCTTTGCTGCCCCGCCCCAGAGCCCCACGTGGCTGCTGTACTCCCACCCAGT
GGGGCGCAGGGCTCGGCTACACATGGGTATCCGCCTGAGCCAGTCCCCGCTGGACCCGCGCAGCTGGACA
GAGCCCTGGGTGATCTACGAGGGCCCCAGCGGCTACTCCGACCTGGCGTCCATCGGGCCGGCCCCTGAGG
GGGGCCTGGTTTTTGCCTGCCTGTACGAGAGCGGGGCCAGGACCTCCTATGATGAGATTTCCTTTTGTAC
ATTCTCCCTGCGTGAGGTCCTGGAGAACGTGCCCGCCAGCCCCAAACCGCCCAACCTTGGGGACAAGCCT
CGGGGGTGCTGCTGGCCCTCCTGA

Translation (497 aa):
MMSSAAFPRWLQSMGVPRTPSRTVLFERERTGLTYRVPSLLPVPPGPTLLAFVEQRLSPDDSHAHRLVLR
RGTLAGGSVRWGALHVLGTAALAEHRSMNPCPVHDAGTGTVFLFFIAVLGHTPEAVQIATGRNAARLCCV
ASRDAGLSWGSARDLTEEAIGGAVQDWATFAVGPGHGVQLPSGRLLVPAYTYRVDRRECFGKICRTSPHS
FAFYSDDHGRTWRCGGLVPNLRSGECQLAAVDGGQAGSFLYCNARSPLGSRVQALSTDEGTSFLPAERVA
SLPETAWGCQGSIVGFPAPAPNRPRDDSWSVGPGSPLQPPLLGPGVHEPPEEAAVDPRGGQVPGGPFSRL
QPRGDGPRQPGPRPGVSGDVGSWTLALPMPFAAPPQSPTWLLYSHPVGRRARLHMGIRLSQSPLDPRSWT
EPWVIYEGPSGYSDLASIGPAPEGGLVFACLYESGARTSYDEISFCTFSLREVLENVPASPKPPNLGDKP
RGCCWPS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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