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Report for CCDS75151.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75151.1 Public Homo sapiens 4 RASGEF1B 24 110 108 CCDS HistoryNCBI Gene:153020Re-query CCDS DB by CCDS ID:75151.1Re-query CCDS DB by GeneID:153020See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75151.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335927.11 ENSP00000338437.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000335927.11Link to Ensembl Protein Viewer:ENSP00000338437.7Re-query CCDS DB by Nucleotide ID:ENST00000335927Re-query CCDS DB by Protein ID:ENSP00000338437
Original member Current member NCBI NM_001300736.2 NP_001287665.1 Accepted alive Link to Nucleotide Sequence:NM_001300736.2Link to Protein Sequence:NP_001287665.1Re-query CCDS DB by Nucleotide ID:NM_001300736Re-query CCDS DB by Protein ID:NP_001287665Link to BLAST:NP_001287665.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287665.1 431 Q0VAM2-2 431 100% 0 0

Chromosomal Locations for CCDS 75151.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 81427768 81427792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81432299 81432371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81433840 81433963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81434639 81434734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81440834 81440929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81442297 81442376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81445526 81445628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81445743 81445838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81447504 81447578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81448069 81448281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81456651 81456788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 81459332 81459508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1296 nt):
ATGCCTCAGACTCCTCCCTTTTCAGCAATGTTTGACAGCAGTGGTTACAATCGAAACCTCTATCAGTCTG
CAGAGGACAGCTGTGGAGGGTTGTATTACCATGACAACAACCTCCTCTCTGGATCCCTGGAAGCACTCAT
CCAGCACTTAGTACCTAATGTGGATTACTATCCAGATAACCAGATGAGAAAAATTGCACCCAAAATCCTT
CAACTCCTCACGGAATGGACGGAAACATTTCCCTATGATTTTCGGGATGAAAGAATGATGAGAAACTTAA
AAGATCTGGCTCACCGAATAGCCAGTGGCGAAGAGACATACAGAAAGAATGTCCAGCAAATGATGCAGTG
TCTGATCCGCAAGCTTGCTGCGCTCAGCCAGTACGAAGAAGTCCTGGCAAAAATCAGCTCCACATCCACA
GATCGGCTCACAGTTCTCAAGACCAAGCCACAGTCTATACAAAGGGATATCATTACTGTCTGCAACGACC
CTTACACGTTGGCCCAGCAGCTGACTCATATAGAGCTGGAGAGGCTCAATTATATTGGGCCAGAAGAATT
TGTTCAGGCGTTCGTGCAGAAGGACCCTTTGGATAATGACAAGAGTTGCTACAGTGAACGGAAGAAAACA
CGAAACTTAGAAGCTTACGTGGAATGGTTTAATCGCCTCAGCTACTTGGTTGCTACAGAAATCTGTATGC
CTGTTAAGAAAAAACACCGAGCAAGAATGATTGAGTATTTCATTGACGTAGCTCGGGAGTGTTTTAACAT
TGGCAACTTCAACTCCTTGATGGCGATAATCTCTGGTATGAATATGAGCCCAGTCTCTCGACTAAAAAAA
ACTTGGGCCAAAGTGAAGACTGCAAAATTTGACATTCTTGAGCATCAGATGGACCCTTCAAGCAATTTCT
ATAATTATCGAACAGCTCTTCGTGGGGCAGCACAAAGGTCTTTAACTGCTCATAGTAGTAGAGAAAAGAT
TGTGATACCATTCTTCAGTCTCTTAATCAAAGATATTTATTTCCTCAATGAGGGTTGTGCCAACCGCCTT
CCCAATGGCCATGTCAATTTTGAGAAATTTTGGGAACTGGCCAAACAAGTGAGTGAATTTATGACATGGA
AACAAGTGGAGTGTCCATTTGAGAGGGACCGGAAGATCTTGCAGTATCTGCTCACAGTACCAGTCTTCAG
TGAAGATGCTCTCTACTTGGCTTCTTATGAGAGTGAAGGACCTGAAAATCATATAGAGAAAGACAGATGG
AAGTCTTTAAGGTCGAGCCTCTTAGGCAGAGTTTAA

Translation (431 aa):
MPQTPPFSAMFDSSGYNRNLYQSAEDSCGGLYYHDNNLLSGSLEALIQHLVPNVDYYPDNQMRKIAPKIL
QLLTEWTETFPYDFRDERMMRNLKDLAHRIASGEETYRKNVQQMMQCLIRKLAALSQYEEVLAKISSTST
DRLTVLKTKPQSIQRDIITVCNDPYTLAQQLTHIELERLNYIGPEEFVQAFVQKDPLDNDKSCYSERKKT
RNLEAYVEWFNRLSYLVATEICMPVKKKHRARMIEYFIDVARECFNIGNFNSLMAIISGMNMSPVSRLKK
TWAKVKTAKFDILEHQMDPSSNFYNYRTALRGAAQRSLTAHSSREKIVIPFFSLLIKDIYFLNEGCANRL
PNGHVNFEKFWELAKQVSEFMTWKQVECPFERDRKILQYLLTVPVFSEDALYLASYESEGPENHIEKDRW
KSLRSSLLGRV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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