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Report for CCDS32924.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32924.1 Public Homo sapiens 19 ZSWIM4 24 110 108 CCDS HistoryNCBI Gene:65249Re-query CCDS DB by CCDS ID:32924.1Re-query CCDS DB by GeneID:65249See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32924.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000254323.6 ENSP00000254323.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000254323.6Link to Ensembl Protein Viewer:ENSP00000254323.2Re-query CCDS DB by Nucleotide ID:ENST00000254323Re-query CCDS DB by Protein ID:ENSP00000254323
Original member Current member NCBI NM_023072.3 NP_075560.2 Accepted alive Link to Nucleotide Sequence:NM_023072.3Link to Protein Sequence:NP_075560.2Re-query CCDS DB by Nucleotide ID:NM_023072Re-query CCDS DB by Protein ID:NP_075560Link to BLAST:NP_075560.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075560.2 989 Q9H7M6 989 100% 0 0

Chromosomal Locations for CCDS 32924.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 13795649 13795801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13799720 13799921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13804792 13805148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13808836 13808984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13809070 13809220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13812997 13813164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13817216 13817353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13817722 13817976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13819357 13819492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13823346 13823500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13825550 13825713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13828645 13828726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 13830191 13831050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2970 nt):
ATGGAACCCCCCGCGGCCAAGCGGAGCCGGGGCTGCCCCGCGGGACCCGAGGAGCGCGATGCCGGGGCCG
GGGCCGCGCGTGGCCGGGGCCGGCCCGAGGCGCTGCTGGACCTCAGCGCCAAGCGGGTAGCCGAGAGCTG
GGCCTTCGAGCAGGTGGAGGAGCGGTTCTCCCGGGTGCCTGAGCCCGTCCAGAAGCGCATCGTGTTTTGG
TCGTTTCCACGCAGTGAACGGGAAATATGTATGTACTCGTCGCTGGGTTACCCGCCCCCAGAGGGCGAGC
ACGATGCCCGGGTGCCCTTTACCCGCGGGCTGCACCTGCTCCAGAGCGGGGCCGTGGACCGCGTGTTGCA
AGTGGGATTCCACCTGAGCGGAAACATCCGCGAGCCAGGGAGTCCTGGAGAGCCCGAGCGCCTCTACCAT
GTCTCCATCAGCTTTGATCGCTGCAAGATCACGTCCGTGAGCTGCGGCTGTGACAACCGCGACCTCTTCT
ACTGTGCCCACGTGGTGGCCCTGTCCCTGTACCGCATTCGGCACGCCCACCAGGTGGAGCTGCGGCTGCC
CATCTCCGAGACGCTCTCCCAGATGAACCGGGACCAGCTGCAGAAGTTCGTGCAGTACCTCATCAGCGCC
CATCACACTGAGGTGCTGCCCACTGCTCAGCGCTTGGCTGATGAGATCCTCCTGCTGGGCTCCGAGATCA
ACTTGGTGAATGGTGCCCCAGACCCCACCGCCGGCGCAGGAATCGAGGACGCCAACTGCTGGCACCTGGA
CGAGGAGCAGATCCAGGAGCAGGTGAAGCAGCTACTGTCCAATGGCGGCTACTACGGGGCCAGCCAGCAG
CTGCGCTCCATGTTCAGCAAGGTGCGGGAGATGCTGCGAATGCGGGACTCCAACGGGGCGCGCATGCTGA
TTCTCATGACCGAGCAGTTCCTGCAGGACACGCGCCTGGCCCTGTGGCGGCAGCAGGGCGCGGGCATGAC
GGACAAGTGCCGGCAGCTCTGGGATGAGCTGGGGGCCCTGTGGGTTTGCGTCGTCCTGAGCCCCCACTGC
AAACCAGAGGAAAGGGCAGGCTGGCTCCAGCTACTCAGCAGGTGGGACAAGCTCGACGTCTGCCCACTGG
AAGAGGGCAACTACTCCTTCGACGGCCCCAGCCTGCAGCCCACCATGGCCCCCGCCCCAGAGCTGCTCCA
GAAGGGCTCCACCTGCATCACCAACACCGAAGGATGGGTGGGGCACCCCCTGGACCCCATTGGCTGCCTC
TGCAGGGCGCTCCTGGAGGCCTGTCGTCTGGAGGAGGAGACACTTACCCTTTACCCAGACTCAGGCCCCG
AGAAGCGGAAGGTGGCCTACCAGCACGTGCCTGTGCCCGGGAGCCCTGGGGAGTCCTACTTGGTGCTGGC
GCTGGAGGTGGCACTGCTGGGGCTGGGGCAGCAGCGGGCCCTGCCGGAGGGGCTGTACGCCCAGGACAAG
GTGGTGCGCAACGAGGAGCAGCTGCTGGCCCTGCTGGAGGAGGTGGAGTTGGATGAGCGGTTGGTGCAGG
TGCTGCGCAAGCAGGCGGGGCTGCTGCTGGAAGGGGGTCCCTTCAGTGGCTTTGGGGAGGTGCTGTTCCG
GGAGAGCGTGCCCATGCACACCTGTGCCCGCTACCTGTTCACCGCACTGCTGCCTCATGACCCGGACCTG
GCCTATCGCCTCGCGCTGCGAGCTATGAGGCTGCCCATACTGGAGACAGCATTTCCTGCTGGAGAACCTC
ATCCCAGCCCGCTGGACTCCATCATGAGCAACCGCTTCCCCCGCTGGTTCATCCTTGGCCACCTGGAGAC
CCGCCAGTGTGAACTGGCTTCCACCATGTTGACGGCCGCCAAGGGAGACCCCAAGTGGCTGCACACGGTA
CTGGGCTCCATCCAGCAGAACATCCACTCTCCGGCCCTGCTCTTTAAGCTGGCGCAGGACGCCTGCAAGA
CAGCCACCCCGGTCAGCGCCCCACCAGACACCACGCTGCTGGGCATCGCACTGGAGCTGGGGCTGCAGGT
GATGCGGATGACTCTGAACGTAATGACCTGGCGGCGGAGGGAGATGGTGCGCTGGCTGGTCAGCTGTGCC
ACAGAGATTGGCCCGCAAGCCCTGATGAATATCATGCAGAACTGGTATTCCTTATTCACACCAGTGGAGG
CGGCTACCATCGTGGCAGTGACGGGCACCACACACGCCACTCTGCTGCGACTGCAGCTGGACACATCGCG
GAGGGAGGAGCTCTGGGCCTGCGCCCGCACCCTGGCCTTGCAGTGCGCGATGAAGGACCCTCAGAACTGC
GCCTTGCCTGCCCTGACCCTGTGCGAGAAGAACCACTCGGCCTTCGAGGCGGCCTACCAGATCGTGCTGG
ACGCGGCGGCCGGCGGCCTGGGCCACGCCCACCTCTTCACTGTGGCCCGCTATATGGAGCACCGCGGGCT
GCCGCTCCGGGCCTACAAGCTGGCGACGCTGGCCCTGGCGCAGCTCAGCATCGCCTTCAACCAGGACAGC
CACCCTGCCGTCAACGACGTGCTTTGGGCCTGCTCTCTCAGCCACTCCCTGGGCCGGCACGAGCTCTCTG
CCATCGTCCCCCTCATCATTCGCAGCATCCACTGTGCCCCAATGCTGTCCGATATTCTGCGCCGCTGGAC
TCTCTCGGCGCCCGGTCTGGGCCCCTTAGGGGCACGCCGGGCCGCCAAGCCACTGGGTGCCGACCGGGCG
CCGCTCTGCCAGCTCCTGGACGCGGCAGTCACCGCCTACATCACCACCAGCCACTCGCGCCTCACGCACA
TCAGCCCGCGGCACTATGGGGATTTCATCGAATTCCTGGGCAAGGCCCGGGAGACCTTCCTGCTGGCGCC
CGACGGGCACCTCCAGTTCTCACAGTTCTTGGAGAACCTCAAACAGACCTACAAGGGCAAGAAGAAACTC
ATGCTTTTGGTGCGGGAGCGTTTTGGTTGA

Translation (989 aa):
MEPPAAKRSRGCPAGPEERDAGAGAARGRGRPEALLDLSAKRVAESWAFEQVEERFSRVPEPVQKRIVFW
SFPRSEREICMYSSLGYPPPEGEHDARVPFTRGLHLLQSGAVDRVLQVGFHLSGNIREPGSPGEPERLYH
VSISFDRCKITSVSCGCDNRDLFYCAHVVALSLYRIRHAHQVELRLPISETLSQMNRDQLQKFVQYLISA
HHTEVLPTAQRLADEILLLGSEINLVNGAPDPTAGAGIEDANCWHLDEEQIQEQVKQLLSNGGYYGASQQ
LRSMFSKVREMLRMRDSNGARMLILMTEQFLQDTRLALWRQQGAGMTDKCRQLWDELGALWVCVVLSPHC
KPEERAGWLQLLSRWDKLDVCPLEEGNYSFDGPSLQPTMAPAPELLQKGSTCITNTEGWVGHPLDPIGCL
CRALLEACRLEEETLTLYPDSGPEKRKVAYQHVPVPGSPGESYLVLALEVALLGLGQQRALPEGLYAQDK
VVRNEEQLLALLEEVELDERLVQVLRKQAGLLLEGGPFSGFGEVLFRESVPMHTCARYLFTALLPHDPDL
AYRLALRAMRLPILETAFPAGEPHPSPLDSIMSNRFPRWFILGHLETRQCELASTMLTAAKGDPKWLHTV
LGSIQQNIHSPALLFKLAQDACKTATPVSAPPDTTLLGIALELGLQVMRMTLNVMTWRRREMVRWLVSCA
TEIGPQALMNIMQNWYSLFTPVEAATIVAVTGTTHATLLRLQLDTSRREELWACARTLALQCAMKDPQNC
ALPALTLCEKNHSAFEAAYQIVLDAAAGGLGHAHLFTVARYMEHRGLPLRAYKLATLALAQLSIAFNQDS
HPAVNDVLWACSLSHSLGRHELSAIVPLIIRSIHCAPMLSDILRRWTLSAPGLGPLGARRAAKPLGADRA
PLCQLLDAAVTAYITTSHSRLTHISPRHYGDFIEFLGKARETFLLAPDGHLQFSQFLENLKQTYKGKKKL
MLLVRERFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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