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Report for CCDS11152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11152.1 Public Homo sapiens 17 GAS7 24 110 108 CCDS HistoryNCBI Gene:8522Re-query CCDS DB by CCDS ID:11152.1Re-query CCDS DB by GeneID:8522See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11152.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432992.7 ENSP00000407552.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000432992.7Link to Ensembl Protein Viewer:ENSP00000407552.2Re-query CCDS DB by Nucleotide ID:ENST00000432992Re-query CCDS DB by Protein ID:ENSP00000407552
Original member Current member NCBI NM_201433.2 NP_958839.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_201433.2Link to Protein Sequence:NP_958839.1Re-query CCDS DB by Nucleotide ID:NM_201433Re-query CCDS DB by Protein ID:NP_958839Link to BLAST:NP_958839.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_958839.1 476 O60861-3 476 100% 0 0

Chromosomal Locations for CCDS 11152.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 9917228 9917341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9918001 9918099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9919626 9919705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9925476 9925599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9926641 9926769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9934166 9934244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9940126 9940200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9943121 9943236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9946894 9946983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9959202 9959255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9969677 9969762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9981804 9981884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 10019777 10019897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 10198208 10198390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1431 nt):
ATGTCCGGCGCTCGCTGCCGGACCCTGTACCCCTTCTCCGGGGAGCGGCACGGCCAGGGGCTGCGCTTCG
CCGCGGGCGAGCTGATCACGCTGCTGCAGGTCCCGGACGGCGGCTGGTGGGAAGGCGAGAAGGAGGACGG
GCTCCGTGGCTGGTTCCCGGCGAGCTACGTGCAGTTGCTGGAGAAGCCTGGAATGGTCCCCCCTCCGCCG
GGAGAAGAAAGCCAGACGGTCATCCTTCCACCTGGCTGGCAGAGCTACCTGTCGCCTCAGGGCCGGCGGT
ACTATGTCAACACGACCACCAATGAGACCACCTGGGAACGTCCCAGCAGTTCTCCTGGGATTCCAGCCAG
CCCTGGCTCTCACAGGAGCTCTCTGCCTCCAACAGTGAATGGATACCACGCATCAGGGACCCCAGCGCAC
CCTCCAGAGACTGCCCACATGAGTGTCCGAAAATCCACCGGTGATTCCCAGAACCTGGGATCCTCATCGC
CAAGCAAAAAGCAGAGCAAGGAAAACACCATCACAATAAACTGTGTGACGTTCCCTCACCCAGACACGAT
GCCGGAACAGCAGCTGCTGAAACCAACCGAGTGGAGCTACTGCGACTACTTCTGGGCTGATAAGAAGGAC
CCCCAAGGCAACGGCACCGTGGCTGGGTTTGAACTACTGCTCCAGAAACAGCTGAAGGGCAAACAAATGC
AGAAGGAAATGTCAGAATTCATCCGGGAAAGGATAAAGATTGAAGAAGACTATGCGAAGAACTTAGCTAA
GCTCTCTCAGAACTCCTTGGCTTCACAGGAGGAAGGCTCCTTGGGAGAGGCGTGGGCCCAGGTGAAGAAG
AGCCTGGCGGACGAAGCAGAAGTTCACCTCAAGTTCTCTGCCAAGCTTCACAGCGAGGTGGAGAAGCCCC
TGATGAACTTCCGTGAGAACTTCAAGAAAGACATGAAGAAGTGCGACCACCACATTGCCGACCTTCGCAA
GCAGCTCGCCAGCCGCTATGCCTCGGTGGAGAAGGCCCGGAAAGCCCTCACAGAGCGGCAGAGAGACCTG
GAGATGAAGACCCAGCAGCTGGAGATCAAGCTGAGCAACAAGACAGAGGAGGACATCAAGAAGGCGCGGA
GAAAGTCCACACAGGCTGGAGACGACCTCATGCGCTGTGTGGATCTCTACAACCAGGCCCAGTCCAAATG
GTTTGAAGAGATGGTGACCACCACATTGGAGCTAGAGCGGCTGGAGGTGGAGAGGGTAGAGATGATCCGG
CAGCACCTGTGCCAGTACACGCAGCTGCGGCATGAAACAGACATGTTCAACCAAAGCACAGTCGAGCCCG
TGGATCAGCTGCTTCGAAAAGTGGACCCGGCCAAAGACAGGGAGCTGTGGGTCAGAGAGCACAAGACGGG
CAACATCCGCCCTGTGGACATGGAGATCTAG

Translation (476 aa):
MSGARCRTLYPFSGERHGQGLRFAAGELITLLQVPDGGWWEGEKEDGLRGWFPASYVQLLEKPGMVPPPP
GEESQTVILPPGWQSYLSPQGRRYYVNTTTNETTWERPSSSPGIPASPGSHRSSLPPTVNGYHASGTPAH
PPETAHMSVRKSTGDSQNLGSSSPSKKQSKENTITINCVTFPHPDTMPEQQLLKPTEWSYCDYFWADKKD
PQGNGTVAGFELLLQKQLKGKQMQKEMSEFIRERIKIEEDYAKNLAKLSQNSLASQEEGSLGEAWAQVKK
SLADEAEVHLKFSAKLHSEVEKPLMNFRENFKKDMKKCDHHIADLRKQLASRYASVEKARKALTERQRDL
EMKTQQLEIKLSNKTEEDIKKARRKSTQAGDDLMRCVDLYNQAQSKWFEEMVTTTLELERLEVERVEMIR
QHLCQYTQLRHETDMFNQSTVEPVDQLLRKVDPAKDRELWVREHKTGNIRPVDMEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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