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Report for CCDS55939.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55939.1 Public Homo sapiens 14 FAM181A 24 110 108 CCDS HistoryNCBI Gene:90050Re-query CCDS DB by CCDS ID:55939.1Re-query CCDS DB by GeneID:90050See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55939.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000557000.2 ENSP00000451445.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000557000.2Link to Ensembl Protein Viewer:ENSP00000451445.2Re-query CCDS DB by Nucleotide ID:ENST00000557000Re-query CCDS DB by Protein ID:ENSP00000451445
Original member Current member EBI ENST00000556222.2 ENSP00000451678.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000556222.2Link to Ensembl Protein Viewer:ENSP00000451678.1Re-query CCDS DB by Nucleotide ID:ENST00000556222Re-query CCDS DB by Protein ID:ENSP00000451678
Original member Current member EBI ENST00000557719.1 ENSP00000451802.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000557719.1Link to Ensembl Protein Viewer:ENSP00000451802.1Re-query CCDS DB by Nucleotide ID:ENST00000557719Re-query CCDS DB by Protein ID:ENSP00000451802
Original member Current member NCBI NM_001207071.2 NP_001194000.1 Accepted alive Link to Nucleotide Sequence:NM_001207071.2Link to Protein Sequence:NP_001194000.1Re-query CCDS DB by Nucleotide ID:NM_001207071Re-query CCDS DB by Protein ID:NP_001194000Link to BLAST:NP_001194000.1
Original member Current member NCBI NM_001207072.2 NP_001194001.1 Accepted alive Link to Nucleotide Sequence:NM_001207072.2Link to Protein Sequence:NP_001194001.1Re-query CCDS DB by Nucleotide ID:NM_001207072Re-query CCDS DB by Protein ID:NP_001194001Link to BLAST:NP_001194001.1
Original member Current member NCBI NM_001207073.2 NP_001194002.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001207073.2Link to Protein Sequence:NP_001194002.1Re-query CCDS DB by Nucleotide ID:NM_001207073Re-query CCDS DB by Protein ID:NP_001194002Link to BLAST:NP_001194002.1
Original member Current member NCBI NM_001207074.2 NP_001194003.1 Accepted alive Link to Nucleotide Sequence:NM_001207074.2Link to Protein Sequence:NP_001194003.1Re-query CCDS DB by Nucleotide ID:NM_001207074Re-query CCDS DB by Protein ID:NP_001194003Link to BLAST:NP_001194003.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001194000.1 292 Q8N9Y4-2 292 100% 0 0
NP_001194001.1 292 Q8N9Y4-2 292 100% 0 0
NP_001194002.1 292 Q8N9Y4-2 292 100% 0 0
NP_001194003.1 292 Q8N9Y4-2 292 100% 0 0

Chromosomal Locations for CCDS 55939.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 93928286 93929164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGGCATCCGACAGTGATGTGAAGATGCTGCTGAACTTCGTGAACCTGGCGTCCAGCGACATCAAGGCAG
CCCTGGATAAGTCCGCACCCTGCCGCCGCTCCGTGGACCATCGCAAGTACCTGCAGAAGCAGCTCAAGCG
CTTCTCCCAGAAGTATTCCCGGCTCCCGCGGGGCCTTCCTGGCAGAGCTGCTGAGCCCTACCTGAAAAGG
GGGTCTGAGGACCGGCCCAGGAGGCTGCTCCTGGATTTGGGCCCTGATTCCAGCCCCGGCGGGGGTGGGG
GCTGCAAGGAGAAGGTGCTGAGGAACCCCTACAGGGAGGAATGTCTTGCTAAGGAGCAGCTCCCACAGAG
GCAGCATCCAGAAGCTGCCCAGCCTGGCCAGGTGCCCATGAGGAAAAGACAGCTGCCCGCTTCCTTCTGG
GAAGAGCCAAGGCCCACCCACAGCTACCATGTGGGGCTGGAGGGGGGACTGGGCCCCAGGGAGGGACCTC
CCTATGAGGGTAAGAAAAATTGCAAGGGCTTGGAGCCCCTGGGACCTGAGACTACCCTGGTGTCCATGTC
TCCAAGGGCCCTGGCTGAAAAGGAGCCGCTCAAGATGCCTGGGGTCTCCTTGGTGGGCCGCGTCAATGCC
TGGAGTTGCTGCCCCTTCCAGTACCATGGACAGCCCATCTATCCGGGCCCCCTGGGGGCACTGCCTCAGA
GTCCTGTCCCCAGCCTGGGCCTTTGGAGGAAGAGCCCAGCCTTTCCCGGGGAGCTGGCGCACCTCTGCAA
GGATGTGGACGGCCTGGGGCAGAAGGTGTGCAGGCCCGTGGTGCTGAAACCCATCCCCACCAAGCCAGCC
GTGCCCCCACCCATCTTCAATGTCTTTGGCTACCTCTAG

Translation (292 aa):
MASDSDVKMLLNFVNLASSDIKAALDKSAPCRRSVDHRKYLQKQLKRFSQKYSRLPRGLPGRAAEPYLKR
GSEDRPRRLLLDLGPDSSPGGGGGCKEKVLRNPYREECLAKEQLPQRQHPEAAQPGQVPMRKRQLPASFW
EEPRPTHSYHVGLEGGLGPREGPPYEGKKNCKGLEPLGPETTLVSMSPRALAEKEPLKMPGVSLVGRVNA
WSCCPFQYHGQPIYPGPLGALPQSPVPSLGLWRKSPAFPGELAHLCKDVDGLGQKVCRPVVLKPIPTKPA
VPPPIFNVFGYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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