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Report for CCDS55764.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55764.1 Public Homo sapiens 11 CTNND1 24 110 108 CCDS HistoryNCBI Gene:1500Re-query CCDS DB by CCDS ID:55764.1Re-query CCDS DB by GeneID:1500See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55764.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000530748.5 ENSP00000436744.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000530748.5Link to Ensembl Protein Viewer:ENSP00000436744.1Re-query CCDS DB by Nucleotide ID:ENST00000530748Re-query CCDS DB by Protein ID:ENSP00000436744
Original member Current member NCBI NM_001206884.2 NP_001193813.1 Accepted alive Link to Nucleotide Sequence:NM_001206884.2Link to Protein Sequence:NP_001193813.1Re-query CCDS DB by Nucleotide ID:NM_001206884Re-query CCDS DB by Protein ID:NP_001193813Link to BLAST:NP_001193813.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193813.1 885 O60716-11 885 100% 0 0

Chromosomal Locations for CCDS 55764.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 57791641 57791673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57794010 57794081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57795577 57795729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57796457 57796992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57801733 57802196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57803621 57803804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57804663 57804780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57805882 57806035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57806461 57806478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57806915 57806983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57808165 57808292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57808390 57808540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57809274 57809466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57810109 57810223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57811399 57811486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57814311 57814373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57815394 57815500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57816297 57816308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2658 nt):
ATGGCCAACGGCACACTCACCCGCCGGCATCAGAACGGCCGGTTTGTGGGCGATGCTGACCTTGAAAGAC
AGAAATTTTCAGATTTGAAACTCAACGGACCCCAGGATCACAGTCACCTTCTATATAGCACCATCCCCAG
GATGCAGGAGCCGGGGCAGATTGTGGAGACCTACACGGAGGAGGATCCTGAGGGAGCCATGTCTGTAGTC
TCTGTGGAGACCTCAGATGATGGGACCACTCGGCGCACAGAGACCACGGTCAAGAAAGTAGTGAAGACTG
TGACAACACGGACAGTACAGCCAGTCGCTATGGGACCAGACGGGTTGCCTGTGGATGCTTCATCAGTTTC
TAACAACTATATCCAGACTTTGGGTCGTGATTTCCGCAAGAATGGCAATGGGGGACCTGGTCCCTATGTG
GGGCAAGCTGGCACTGCTACCCTTCCTAGGAACTTCCACTACCCTCCTGATGGTTATAGTCGCCACTATG
AAGATGGTTATCCAGGTGGCAGTGATAACTATGGCAGTCTGTCCCGGGTGACCCGCATTGAGGAGCGGTA
TAGGCCCAGCATGGAAGGCTACCGGGCACCTAGTAGACAGGATGTGTATGGGCCCCAACCCCAGGTTCGG
GTAGGTGGGAGCAGCGTGGATCTGCATCGCTTTCATCCAGAGCCTTATGGGCTAGAGGATGACCAGCGTA
GTATGGGCTATGATGACCTGGATTATGGTATGATGTCTGATTATGGCACTGCCCGTCGGACTGGGACACC
CTCTGACCCTCGTCGGCGCCTCAGGAGCTATGAAGACATGATTGGTGAGGAGGTGCCATCGGATCAATAC
TACTGGGCTCCTTTGGCCCAGCATGAGCGAGGAAGTTTAGCAAGCTTGGATAGCCTGCGCAAAGGAGGGC
CTCCACCTCCTAATTGGAGACAGCCAGAGCTGCCAGAGGTGATCGCCATGCTTGGATTCCGCTTGGATGC
TGTCAAGTCCAATGCAGCTGCATACCTGCAACACTTATGCTACCGCAATGACAAGGTGAAGACTGACGTG
CGGAAGCTCAAGGGCATCCCAGTACTGGTGGGATTGTTAGACCATCCCAAAAAGGAAGTGCACCTTGGAG
CCTGTGGAGCTCTCAAGAATATCTCTTTTGGACGTGACCAGGATAACAAGATTGCCATAAAAAACTGTGA
TGGTGTGCCTGCCCTTGTGCGATTGCTTCGAAAGGCTCGTGATATGGACCTTACTGAAGTTATTACCGGA
ACCCTGTGGAATCTTTCATCCCATGACTCAATCAAAATGGAGATTGTGGACCATGCACTGCATGCCTTGA
CAGATGAAGTGATCATTCCTCATTCTGGTTGGGAGCGGGAACCTAATGAAGACTGTAAGCCACGCCACAT
TGAGTGGGAATCGGTGCTCACCAACACAGCTGGCTGCCTTAGGAATGTAAGCTCAGAGAGGAGTGAAGCT
CGCCGGAAACTTCGGGAATGTGATGGTTTAGTTGATGCCCTCATTTTCATTGTTCAGGCTGAGATTGGGC
AGAAGGATTCAGACAGCAAGCTTGTAGAGAACTGTGTTTGCCTTCTTCGGAACTTATCATATCAAGTTCA
CCGGGAGATCCCACAGGCAGAGCGTTACCAAGAGGCAGCTCCCAATGTTGCCAACAATACTGGGCCACAT
GCTGCCAGTTGCTTTGGGGCCAAGAAGGGCAAAGATGAGTGGTTCTCCAGAGGGAAAAAACCTATAGAGG
ATCCAGCAAACGATACAGTGGATTTCCCTAAAAGAACGAGTCCAGCTCGAGGCTATGAGCTCTTATTTCA
GCCAGAGGTGGTTCGGATATACATCTCACTTCTTAAGGAGAGCAAGACTCCTGCCATCCTAGAAGCCTCA
GCTGGAGCTATCCAGAACTTGTGTGCTGGGCGCTGGACGTATGGTCGATACATCCGCTCTGCTCTGCGTC
AAGAGAAGGCTCTTTCTGCCATAGCTGACCTCCTGACTAATGAACATGAACGGGTGGTGAAAGCTGCATC
TGGAGCACTGAGAAACCTGGCTGTGGATGCTCGCAACAAAGAATTAATTGGTAAACATGCTATTCCTAAC
TTGGTAAAGAATCTGCCAGGAGGACAGCAGAACTCCTCTTGGAATTTCTCTGAGGACACTGTCATCTCTA
TTTTGAACACTATCAACGAGGTTATCGCTGAGAACTTGGAGGCTGCCAAAAAGCTTCGAGAGACACAGGG
TATTGAGAAGCTGGTGTTGATCAACAAATCAGGGAACCGCTCAGAAAAAGAAGTTCGAGCAGCAGCACTT
GTATTACAGACAATCTGGGGATATAAGGAACTGCGGAAGCCACTGGAAAAAGAAGGATGGAAGAAATCAG
ACTTTCAGGTGAATCTAAACAATGCTTCCCGAAGCCAGAGCAGTCATTCATATGATGATAGTACTCTCCC
TCTCATTGACCGGAACCAAAAATCAGATAAGAAACCTGATCGGGAAGAAATTCAGATGAGCAATATGGGA
TCAAACACAAAATCACTAGATAACAACTATTCCACACCAAATGAGAGAGGAGACCACAATAGAACACTGG
ATCGATCGGGGGATCTAGGCGACATGGAGCCATTGAAGGGAACAACACCCTTGATGCAGAAGATTTAG

Translation (885 aa):
MANGTLTRRHQNGRFVGDADLERQKFSDLKLNGPQDHSHLLYSTIPRMQEPGQIVETYTEEDPEGAMSVV
SVETSDDGTTRRTETTVKKVVKTVTTRTVQPVAMGPDGLPVDASSVSNNYIQTLGRDFRKNGNGGPGPYV
GQAGTATLPRNFHYPPDGYSRHYEDGYPGGSDNYGSLSRVTRIEERYRPSMEGYRAPSRQDVYGPQPQVR
VGGSSVDLHRFHPEPYGLEDDQRSMGYDDLDYGMMSDYGTARRTGTPSDPRRRLRSYEDMIGEEVPSDQY
YWAPLAQHERGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDV
RKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKARDMDLTEVITG
TLWNLSSHDSIKMEIVDHALHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEA
RRKLRECDGLVDALIFIVQAEIGQKDSDSKLVENCVCLLRNLSYQVHREIPQAERYQEAAPNVANNTGPH
AASCFGAKKGKDEWFSRGKKPIEDPANDTVDFPKRTSPARGYELLFQPEVVRIYISLLKESKTPAILEAS
AGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNEHERVVKAASGALRNLAVDARNKELIGKHAIPN
LVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQGIEKLVLINKSGNRSEKEVRAAAL
VLQTIWGYKELRKPLEKEGWKKSDFQVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMG
SNTKSLDNNYSTPNERGDHNRTLDRSGDLGDMEPLKGTTPLMQKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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