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Report for CCDS8625.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8625.1 Public Homo sapiens 12 KLRC1 24 110 108 CCDS HistoryNCBI Gene:3821Re-query CCDS DB by CCDS ID:8625.1Re-query CCDS DB by GeneID:3821See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8625.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359151.8 ENSP00000352064.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359151.8Link to Ensembl Protein Viewer:ENSP00000352064.3Re-query CCDS DB by Nucleotide ID:ENST00000359151Re-query CCDS DB by Protein ID:ENSP00000352064
Original member Current member EBI ENST00000544822.2 ENSP00000438038.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544822.2Link to Ensembl Protein Viewer:ENSP00000438038.1Re-query CCDS DB by Nucleotide ID:ENST00000544822Re-query CCDS DB by Protein ID:ENSP00000438038
Original member Current member NCBI NM_002259.5 NP_002250.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002259.5Link to Protein Sequence:NP_002250.2Re-query CCDS DB by Nucleotide ID:NM_002259Re-query CCDS DB by Protein ID:NP_002250Link to BLAST:NP_002250.2
Original member Current member NCBI NM_213658.3 NP_998823.2 Accepted alive Link to Nucleotide Sequence:NM_213658.3Link to Protein Sequence:NP_998823.2Re-query CCDS DB by Nucleotide ID:NM_213658Re-query CCDS DB by Protein ID:NP_998823Link to BLAST:NP_998823.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002250.2 233 P26715-1 233 100% 0 0
NP_998823.2 233 P26715-1 233 100% 0 0

Chromosomal Locations for CCDS 8625.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 10446551 10446662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10447532 10447632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10449237 10449388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10449914 10449967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10450484 10450579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10450970 10451156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (702 nt):
ATGGATAACCAAGGAGTAATCTACTCAGACCTGAATCTGCCCCCAAACCCAAAGAGGCAGCAACGAAAAC
CTAAAGGCAATAAAAACTCCATTTTAGCAACTGAACAGGAAATAACCTATGCGGAATTAAACCTTCAAAA
AGCTTCTCAGGATTTTCAAGGGAATGACAAAACCTATCACTGCAAAGATTTACCATCAGCTCCAGAGAAG
CTCATTGTTGGGATCCTGGGAATTATCTGTCTTATCTTAATGGCCTCTGTGGTAACGATAGTTGTTATTC
CCTCTACATTAATACAGAGGCACAACAATTCTTCCCTGAATACAAGAACTCAGAAAGCACGTCATTGTGG
CCATTGTCCTGAGGAGTGGATTACATATTCCAACAGTTGTTACTACATTGGTAAGGAAAGAAGAACTTGG
GAAGAGAGTTTGCTGGCCTGTACTTCGAAGAACTCCAGTCTGCTTTCTATAGATAATGAAGAAGAAATGA
AATTTCTGTCCATCATTTCACCATCCTCATGGATTGGTGTGTTTCGTAACAGCAGTCATCATCCATGGGT
GACAATGAATGGTTTGGCTTTCAAACATGAGATAAAAGACTCAGATAATGCTGAACTTAACTGTGCAGTG
CTACAAGTAAATCGACTTAAATCAGCCCAGTGTGGATCTTCAATAATATATCATTGTAAGCATAAGCTTT
AG

Translation (233 aa):
MDNQGVIYSDLNLPPNPKRQQRKPKGNKNSILATEQEITYAELNLQKASQDFQGNDKTYHCKDLPSAPEK
LIVGILGIICLILMASVVTIVVIPSTLIQRHNNSSLNTRTQKARHCGHCPEEWITYSNSCYYIGKERRTW
EESLLACTSKNSSLLSIDNEEEMKFLSIISPSSWIGVFRNSSHHPWVTMNGLAFKHEIKDSDNAELNCAV
LQVNRLKSAQCGSSIIYHCKHKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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