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Report for CCDS43957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43957.1 Public Homo sapiens X FAM156B 24 110 108 CCDS HistoryNCBI Gene:727866Re-query CCDS DB by CCDS ID:43957.1Re-query CCDS DB by GeneID:727866See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43957.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000509613.1 ENSP00000422411.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000509613.1Link to Ensembl Protein Viewer:ENSP00000422411.1Re-query CCDS DB by Nucleotide ID:ENST00000509613Re-query CCDS DB by Protein ID:ENSP00000422411
Original member Current member EBI ENST00000416841.8 ENSP00000424864.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000416841.8Link to Ensembl Protein Viewer:ENSP00000424864.1Re-query CCDS DB by Nucleotide ID:ENST00000416841Re-query CCDS DB by Protein ID:ENSP00000424864
Original member Current member EBI ENST00000593751.7 ENSP00000469248.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593751.7Link to Ensembl Protein Viewer:ENSP00000469248.1Re-query CCDS DB by Nucleotide ID:ENST00000593751Re-query CCDS DB by Protein ID:ENSP00000469248
Original member Current member EBI ENST00000616419.4 ENSP00000483008.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616419.4Link to Ensembl Protein Viewer:ENSP00000483008.1Re-query CCDS DB by Nucleotide ID:ENST00000616419Re-query CCDS DB by Protein ID:ENSP00000483008
Original member Current member NCBI NM_001099684.2 NP_001093154.1 Accepted alive Link to Nucleotide Sequence:NM_001099684.2Link to Protein Sequence:NP_001093154.1Re-query CCDS DB by Nucleotide ID:NM_001099684Re-query CCDS DB by Protein ID:NP_001093154Link to BLAST:NP_001093154.1
Original member Current member NCBI NM_001321178.3 NP_001308107.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321178.3Link to Protein Sequence:NP_001308107.1Re-query CCDS DB by Nucleotide ID:NM_001321178Re-query CCDS DB by Protein ID:NP_001308107Link to BLAST:NP_001308107.1
Original member Current member NCBI NM_001321179.2 NP_001308108.1 Accepted alive Link to Nucleotide Sequence:NM_001321179.2Link to Protein Sequence:NP_001308108.1Re-query CCDS DB by Nucleotide ID:NM_001321179Re-query CCDS DB by Protein ID:NP_001308108Link to BLAST:NP_001308108.1
Original member Current member NCBI NM_001321180.1 NP_001308109.1 Accepted alive Link to Nucleotide Sequence:NM_001321180.1Link to Protein Sequence:NP_001308109.1Re-query CCDS DB by Nucleotide ID:NM_001321180Re-query CCDS DB by Protein ID:NP_001308109Link to BLAST:NP_001308109.1
Original member Current member NCBI NM_001321181.2 NP_001308110.1 Accepted alive Link to Nucleotide Sequence:NM_001321181.2Link to Protein Sequence:NP_001308110.1Re-query CCDS DB by Nucleotide ID:NM_001321181Re-query CCDS DB by Protein ID:NP_001308110Link to BLAST:NP_001308110.1
Original member Current member NCBI NM_001321182.2 NP_001308111.1 Accepted alive Link to Nucleotide Sequence:NM_001321182.2Link to Protein Sequence:NP_001308111.1Re-query CCDS DB by Nucleotide ID:NM_001321182Re-query CCDS DB by Protein ID:NP_001308111Link to BLAST:NP_001308111.1
Original member Current member NCBI NM_001321183.1 NP_001308112.1 Accepted alive Link to Nucleotide Sequence:NM_001321183.1Link to Protein Sequence:NP_001308112.1Re-query CCDS DB by Nucleotide ID:NM_001321183Re-query CCDS DB by Protein ID:NP_001308112Link to BLAST:NP_001308112.1
Original member Current member NCBI NM_001321186.2 NP_001308115.1 Accepted alive Link to Nucleotide Sequence:NM_001321186.2Link to Protein Sequence:NP_001308115.1Re-query CCDS DB by Nucleotide ID:NM_001321186Re-query CCDS DB by Protein ID:NP_001308115Link to BLAST:NP_001308115.1
Original member Current member NCBI NM_001321187.2 NP_001308116.1 Accepted alive Link to Nucleotide Sequence:NM_001321187.2Link to Protein Sequence:NP_001308116.1Re-query CCDS DB by Nucleotide ID:NM_001321187Re-query CCDS DB by Protein ID:NP_001308116Link to BLAST:NP_001308116.1
Original member Current member NCBI NM_001321188.1 NP_001308117.1 Accepted alive Link to Nucleotide Sequence:NM_001321188.1Link to Protein Sequence:NP_001308117.1Re-query CCDS DB by Nucleotide ID:NM_001321188Re-query CCDS DB by Protein ID:NP_001308117Link to BLAST:NP_001308117.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093154.1 213 Q8NDB6 213 100% 0 0
NP_001308107.1 213 Q8NDB6 213 100% 0 0
NP_001308108.1 213 Q8NDB6 213 100% 0 0
NP_001308109.1 213 Q8NDB6 213 100% 0 0
NP_001308110.1 213 Q8NDB6 213 100% 0 0
NP_001308111.1 213 Q8NDB6 213 100% 0 0
NP_001308112.1 213 Q8NDB6 213 100% 0 0
NP_001308115.1 213 Q8NDB6 213 100% 0 0
NP_001308116.1 213 Q8NDB6 213 100% 0 0
NP_001308117.1 213 Q8NDB6 213 100% 0 0

Chromosomal Locations for CCDS 43957.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 52907226 52907867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGGATCCACTCCAGAAACGGAATCCAGCATCGCCTTCCAAATCTTCCCCGATGACAGCTGCAGAGACTT
CCCAGGAAGGTCCAGCGCCCTCTCAGCCTTCGTACTCAGAACAGCCGATGATGGGCCTCAGTAACCTGAG
CCCCGGTCCTGGCCCCAGCCAGGCCGTGCCTCTCCCAGAGGGGCTGCTCCGCCAGCGGTACAGAGAGGAG
AAGACCCTGGAAGAGCGGCGGTGGGAGAGGCTGGAGTTCCTTCAGAGGAAGAAAGCATTCCTGCGGCATG
TGAGGAGGAGACACCGCGATCACATGGCCCCCTATGCTGTTGGGAGGGAAGCCAGAATCTCCCCATTAGG
TGACAGAAGTCAGAATCGATTCCGATGTGAATGTCGATACTGCCAGAGCCACAGGCCGAATCTTTCTGGG
ATCCCTGGGGAGAGTAACAGGGCCCCACATCCCTCCTCCTGGGAGACGCTGGTGCAGGGCCTCAGTGGCT
TGACTCTCAGCCTAGGCACCAACCAGCCCGGGCCTCTGCCTGAAGCGGCACTCCAGCCACAGGAGACAGA
GGAGAAGCGCCAGCGAGAGAGGCAGCAGGAGAGCAAAATAATGTTTCAGAGGCTGCTCAAGCAGTGGTTA
GAGGAAAACTGA

Translation (213 aa):
MDPLQKRNPASPSKSSPMTAAETSQEGPAPSQPSYSEQPMMGLSNLSPGPGPSQAVPLPEGLLRQRYREE
KTLEERRWERLEFLQRKKAFLRHVRRRHRDHMAPYAVGREARISPLGDRSQNRFRCECRYCQSHRPNLSG
IPGESNRAPHPSSWETLVQGLSGLTLSLGTNQPGPLPEAALQPQETEEKRQRERQQESKIMFQRLLKQWL
EEN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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