NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS4458.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4458.1 Public Homo sapiens 5 MGAT1 24 110 108 CCDS HistoryNCBI Gene:4245Re-query CCDS DB by CCDS ID:4458.1Re-query CCDS DB by GeneID:4245See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4458.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307826.5 ENSP00000311888.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307826.5Link to Ensembl Protein Viewer:ENSP00000311888.4Re-query CCDS DB by Nucleotide ID:ENST00000307826Re-query CCDS DB by Protein ID:ENSP00000311888
Original member Current member EBI ENST00000333055.8 ENSP00000332073.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000333055.8Link to Ensembl Protein Viewer:ENSP00000332073.3Re-query CCDS DB by Nucleotide ID:ENST00000333055Re-query CCDS DB by Protein ID:ENSP00000332073
Original member Current member EBI ENST00000393340.7 ENSP00000377010.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393340.7Link to Ensembl Protein Viewer:ENSP00000377010.3Re-query CCDS DB by Nucleotide ID:ENST00000393340Re-query CCDS DB by Protein ID:ENSP00000377010
Original member Current member EBI ENST00000427865.2 ENSP00000402838.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000427865.2Link to Ensembl Protein Viewer:ENSP00000402838.2Re-query CCDS DB by Nucleotide ID:ENST00000427865Re-query CCDS DB by Protein ID:ENSP00000402838
Original member Current member EBI ENST00000446023.6 ENSP00000404718.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446023.6Link to Ensembl Protein Viewer:ENSP00000404718.2Re-query CCDS DB by Nucleotide ID:ENST00000446023Re-query CCDS DB by Protein ID:ENSP00000404718
Original member Current member NCBI NM_001114617.2 NP_001108089.1 Accepted alive Link to Nucleotide Sequence:NM_001114617.2Link to Protein Sequence:NP_001108089.1Re-query CCDS DB by Nucleotide ID:NM_001114617Re-query CCDS DB by Protein ID:NP_001108089Link to BLAST:NP_001108089.1
Original member Current member NCBI NM_001114618.1 NP_001108090.1 Accepted alive Link to Nucleotide Sequence:NM_001114618.1Link to Protein Sequence:NP_001108090.1Re-query CCDS DB by Nucleotide ID:NM_001114618Re-query CCDS DB by Protein ID:NP_001108090Link to BLAST:NP_001108090.1
Original member Current member NCBI NM_001114619.1 NP_001108091.1 Accepted alive Link to Nucleotide Sequence:NM_001114619.1Link to Protein Sequence:NP_001108091.1Re-query CCDS DB by Nucleotide ID:NM_001114619Re-query CCDS DB by Protein ID:NP_001108091Link to BLAST:NP_001108091.1
Original member Current member NCBI NM_001114620.1 NP_001108092.1 Accepted alive Link to Nucleotide Sequence:NM_001114620.1Link to Protein Sequence:NP_001108092.1Re-query CCDS DB by Nucleotide ID:NM_001114620Re-query CCDS DB by Protein ID:NP_001108092Link to BLAST:NP_001108092.1
Original member Current member NCBI NM_001364377.2 NP_001351306.1 Accepted alive Link to Nucleotide Sequence:NM_001364377.2Link to Protein Sequence:NP_001351306.1Re-query CCDS DB by Nucleotide ID:NM_001364377Re-query CCDS DB by Protein ID:NP_001351306Link to BLAST:NP_001351306.1
Original member Current member NCBI NM_001364379.2 NP_001351308.1 Accepted alive Link to Nucleotide Sequence:NM_001364379.2Link to Protein Sequence:NP_001351308.1Re-query CCDS DB by Nucleotide ID:NM_001364379Re-query CCDS DB by Protein ID:NP_001351308Link to BLAST:NP_001351308.1
Original member Current member NCBI NM_001364380.2 NP_001351309.1 Accepted alive Link to Nucleotide Sequence:NM_001364380.2Link to Protein Sequence:NP_001351309.1Re-query CCDS DB by Nucleotide ID:NM_001364380Re-query CCDS DB by Protein ID:NP_001351309Link to BLAST:NP_001351309.1
Original member Current member NCBI NM_001364381.2 NP_001351310.1 Accepted alive Link to Nucleotide Sequence:NM_001364381.2Link to Protein Sequence:NP_001351310.1Re-query CCDS DB by Nucleotide ID:NM_001364381Re-query CCDS DB by Protein ID:NP_001351310Link to BLAST:NP_001351310.1
Original member Current member NCBI NM_001364382.2 NP_001351311.1 Accepted alive Link to Nucleotide Sequence:NM_001364382.2Link to Protein Sequence:NP_001351311.1Re-query CCDS DB by Nucleotide ID:NM_001364382Re-query CCDS DB by Protein ID:NP_001351311Link to BLAST:NP_001351311.1
Original member Current member NCBI NM_001364383.2 NP_001351312.1 Accepted alive Link to Nucleotide Sequence:NM_001364383.2Link to Protein Sequence:NP_001351312.1Re-query CCDS DB by Nucleotide ID:NM_001364383Re-query CCDS DB by Protein ID:NP_001351312Link to BLAST:NP_001351312.1
Original member Current member NCBI NM_001364384.2 NP_001351313.1 Accepted alive Link to Nucleotide Sequence:NM_001364384.2Link to Protein Sequence:NP_001351313.1Re-query CCDS DB by Nucleotide ID:NM_001364384Re-query CCDS DB by Protein ID:NP_001351313Link to BLAST:NP_001351313.1
Original member Current member NCBI NM_001364385.2 NP_001351314.1 Accepted alive Link to Nucleotide Sequence:NM_001364385.2Link to Protein Sequence:NP_001351314.1Re-query CCDS DB by Nucleotide ID:NM_001364385Re-query CCDS DB by Protein ID:NP_001351314Link to BLAST:NP_001351314.1
Original member Current member NCBI NM_001364386.2 NP_001351315.1 Accepted alive Link to Nucleotide Sequence:NM_001364386.2Link to Protein Sequence:NP_001351315.1Re-query CCDS DB by Nucleotide ID:NM_001364386Re-query CCDS DB by Protein ID:NP_001351315Link to BLAST:NP_001351315.1
Original member Current member NCBI NM_001364387.2 NP_001351316.1 Accepted alive Link to Nucleotide Sequence:NM_001364387.2Link to Protein Sequence:NP_001351316.1Re-query CCDS DB by Nucleotide ID:NM_001364387Re-query CCDS DB by Protein ID:NP_001351316Link to BLAST:NP_001351316.1
Original member Current member NCBI NM_001364388.2 NP_001351317.1 Accepted alive Link to Nucleotide Sequence:NM_001364388.2Link to Protein Sequence:NP_001351317.1Re-query CCDS DB by Nucleotide ID:NM_001364388Re-query CCDS DB by Protein ID:NP_001351317Link to BLAST:NP_001351317.1
Original member Current member NCBI NM_001364389.2 NP_001351318.1 Accepted alive Link to Nucleotide Sequence:NM_001364389.2Link to Protein Sequence:NP_001351318.1Re-query CCDS DB by Nucleotide ID:NM_001364389Re-query CCDS DB by Protein ID:NP_001351318Link to BLAST:NP_001351318.1
Original member Current member NCBI NM_001364390.2 NP_001351319.1 Accepted alive Link to Nucleotide Sequence:NM_001364390.2Link to Protein Sequence:NP_001351319.1Re-query CCDS DB by Nucleotide ID:NM_001364390Re-query CCDS DB by Protein ID:NP_001351319Link to BLAST:NP_001351319.1
Original member Current member NCBI NM_001364391.2 NP_001351320.1 Accepted alive Link to Nucleotide Sequence:NM_001364391.2Link to Protein Sequence:NP_001351320.1Re-query CCDS DB by Nucleotide ID:NM_001364391Re-query CCDS DB by Protein ID:NP_001351320Link to BLAST:NP_001351320.1
Original member Current member NCBI NM_001364392.2 NP_001351321.1 Accepted alive Link to Nucleotide Sequence:NM_001364392.2Link to Protein Sequence:NP_001351321.1Re-query CCDS DB by Nucleotide ID:NM_001364392Re-query CCDS DB by Protein ID:NP_001351321Link to BLAST:NP_001351321.1
Original member Current member NCBI NM_001364393.2 NP_001351322.1 Accepted alive Link to Nucleotide Sequence:NM_001364393.2Link to Protein Sequence:NP_001351322.1Re-query CCDS DB by Nucleotide ID:NM_001364393Re-query CCDS DB by Protein ID:NP_001351322Link to BLAST:NP_001351322.1
Original member Current member NCBI NM_001364394.2 NP_001351323.1 Accepted alive Link to Nucleotide Sequence:NM_001364394.2Link to Protein Sequence:NP_001351323.1Re-query CCDS DB by Nucleotide ID:NM_001364394Re-query CCDS DB by Protein ID:NP_001351323Link to BLAST:NP_001351323.1
Original member Current member NCBI NM_001364395.2 NP_001351324.1 Accepted alive Link to Nucleotide Sequence:NM_001364395.2Link to Protein Sequence:NP_001351324.1Re-query CCDS DB by Nucleotide ID:NM_001364395Re-query CCDS DB by Protein ID:NP_001351324Link to BLAST:NP_001351324.1
Original member Current member NCBI NM_002406.4 NP_002397.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002406.4Link to Protein Sequence:NP_002397.2Re-query CCDS DB by Nucleotide ID:NM_002406Re-query CCDS DB by Protein ID:NP_002397Link to BLAST:NP_002397.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001108089.1 445 P26572 445 100% 0 0
NP_001108090.1 445 P26572 445 100% 0 0
NP_001108091.1 445 P26572 445 100% 0 0
NP_001108092.1 445 P26572 445 100% 0 0
NP_001351306.1 445 P26572 445 100% 0 0
NP_001351308.1 445 P26572 445 100% 0 0
NP_001351309.1 445 P26572 445 100% 0 0
NP_001351310.1 445 P26572 445 100% 0 0
NP_001351311.1 445 P26572 445 100% 0 0
NP_001351312.1 445 P26572 445 100% 0 0
NP_001351313.1 445 P26572 445 100% 0 0
NP_001351314.1 445 P26572 445 100% 0 0
NP_001351315.1 445 P26572 445 100% 0 0
NP_001351316.1 445 P26572 445 100% 0 0
NP_001351317.1 445 P26572 445 100% 0 0
NP_001351318.1 445 P26572 445 100% 0 0
NP_001351319.1 445 P26572 445 100% 0 0
NP_001351320.1 445 P26572 445 100% 0 0
NP_001351321.1 445 P26572 445 100% 0 0
NP_001351322.1 445 P26572 445 100% 0 0
NP_001351323.1 445 P26572 445 100% 0 0
NP_001351324.1 445 P26572 445 100% 0 0
NP_002397.2 445 P26572 445 100% 0 0

Chromosomal Locations for CCDS 4458.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 180791634 180792971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGCTGAAGAAGCAGTCTGCAGGGCTTGTGCTGTGGGGCGCTATCCTCTTTGTGGCCTGGAATGCCCTGC
TGCTCCTCTTCTTCTGGACGCGCCCAGCACCTGGCAGGCCACCCTCAGTCAGCGCTCTCGATGGCGACCC
CGCCAGCCTCACCCGGGAAGTGATTCGCCTGGCCCAAGACGCCGAGGTGGAGCTGGAGCGGCAGCGTGGG
CTGCTGCAGCAGATCGGGGATGCCCTGTCGAGCCAGCGGGGGAGGGTGCCCACCGCGGCCCCTCCCGCCC
AGCCGCGTGTGCCTGTGACCCCCGCGCCGGCGGTGATTCCCATCCTGGTCATCGCCTGTGACCGCAGCAC
TGTTCGGCGCTGCCTGGACAAGCTGCTGCATTATCGGCCCTCGGCTGAGCTCTTCCCCATCATCGTTAGC
CAGGACTGCGGGCACGAGGAGACGGCCCAGGCCATCGCCTCCTACGGCAGCGCGGTCACGCACATCCGGC
AGCCCGACCTGAGCAGCATTGCGGTGCCGCCGGACCACCGCAAGTTCCAGGGCTACTACAAGATCGCGCG
CCACTACCGCTGGGCGCTGGGCCAGGTCTTCCGGCAGTTTCGCTTCCCCGCGGCCGTGGTGGTGGAGGAT
GACCTGGAGGTGGCCCCGGACTTCTTCGAGTACTTTCGGGCCACCTATCCGCTGCTGAAGGCCGACCCCT
CCCTGTGGTGCGTCTCGGCCTGGAATGACAACGGCAAGGAGCAGATGGTGGACGCCAGCAGGCCTGAGCT
GCTCTACCGCACCGACTTTTTCCCTGGCCTGGGCTGGCTGCTGTTGGCCGAGCTCTGGGCTGAGCTGGAG
CCCAAGTGGCCAAAGGCCTTCTGGGACGACTGGATGCGGCGGCCGGAGCAGCGGCAGGGGCGGGCCTGCA
TACGCCCTGAGATCTCAAGAACGATGACCTTTGGCCGCAAGGGTGTGAGCCACGGGCAGTTCTTTGACCA
GCACCTCAAGTTTATCAAGCTGAACCAGCAGTTTGTGCACTTCACCCAGCTGGACCTGTCTTACCTGCAG
CGGGAGGCCTATGACCGAGATTTCCTCGCCCGCGTCTACGGTGCTCCCCAGCTGCAGGTGGAGAAAGTGA
GGACCAATGACCGGAAGGAGCTGGGGGAGGTGCGGGTGCAGTATACGGGCAGGGACAGCTTCAAGGCTTT
CGCCAAGGCTCTGGGTGTCATGGATGACCTTAAGTCGGGGGTTCCGAGAGCTGGCTACCGGGGTATTGTC
ACCTTCCAGTTCCGGGGCCGCCGTGTCCACCTGGCGCCCCCACTGACGTGGGAGGGCTATGATCCTAGCT
GGAATTAG

Translation (445 aa):
MLKKQSAGLVLWGAILFVAWNALLLLFFWTRPAPGRPPSVSALDGDPASLTREVIRLAQDAEVELERQRG
LLQQIGDALSSQRGRVPTAAPPAQPRVPVTPAPAVIPILVIACDRSTVRRCLDKLLHYRPSAELFPIIVS
QDCGHEETAQAIASYGSAVTHIRQPDLSSIAVPPDHRKFQGYYKIARHYRWALGQVFRQFRFPAAVVVED
DLEVAPDFFEYFRATYPLLKADPSLWCVSAWNDNGKEQMVDASRPELLYRTDFFPGLGWLLLAELWAELE
PKWPKAFWDDWMRRPEQRQGRACIRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVHFTQLDLSYLQ
REAYDRDFLARVYGAPQLQVEKVRTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAGYRGIV
TFQFRGRRVHLAPPLTWEGYDPSWN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH