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Report for CCDS2803.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2803.1 Public Homo sapiens 3 GMPPB 24 110 108 CCDS HistoryNCBI Gene:29925Re-query CCDS DB by CCDS ID:2803.1Re-query CCDS DB by GeneID:29925See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2803.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308388.7 ENSP00000311130.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308388.7Link to Ensembl Protein Viewer:ENSP00000311130.6Re-query CCDS DB by Nucleotide ID:ENST00000308388Re-query CCDS DB by Protein ID:ENSP00000311130
Original member Current member EBI ENST00000480687.5 ENSP00000418565.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000480687.5Link to Ensembl Protein Viewer:ENSP00000418565.1Re-query CCDS DB by Nucleotide ID:ENST00000480687Re-query CCDS DB by Protein ID:ENSP00000418565
Original member Current member NCBI NM_021971.4 NP_068806.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021971.4Link to Protein Sequence:NP_068806.2Re-query CCDS DB by Nucleotide ID:NM_021971Re-query CCDS DB by Protein ID:NP_068806Link to BLAST:NP_068806.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068806.2 360 Q9Y5P6-1 360 100% 0 0

Chromosomal Locations for CCDS 2803.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 49721752 49721883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49721965 49722147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49722231 49722358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49722432 49722510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49722596 49722754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49722972 49723114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49723254 49723302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49723392 49723472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 49723598 49723726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1083 nt):
ATGAAGGCACTGATCTTAGTGGGGGGCTATGGGACGCGGCTACGGCCGCTGACGCTGAGCACCCCGAAGC
CACTGGTGGACTTCTGCAATAAGCCCATCTTGCTGCACCAAGTGGAGGCGCTAGCCGCGGCAGGCGTGGA
CCACGTGATCCTGGCCGTGAGCTACATGTCGCAGGTGCTGGAGAAGGAAATGAAGGCACAGGAGCAGAGG
CTGGGAATCCGAATCTCCATGTCCCATGAAGAGGAGCCTTTGGGGACAGCTGGGCCCCTGGCGCTGGCCC
GTGACCTACTCTCTGAGACTGCAGACCCTTTCTTCGTCCTCAACAGTGACGTGATCTGCGATTTCCCCTT
CCAAGCCATGGTGCAGTTCCACCGGCACCATGGCCAGGAGGGCTCCATCCTGGTGACCAAGGTGGAGGAA
CCCTCCAAGTACGGTGTGGTGGTGTGTGAGGCTGACACAGGCCGCATTCACCGGTTCGTGGAGAAGCCAC
AGGTGTTTGTGTCCAATAAGATCAACGCAGGCATGTACATCCTGAGCCCTGCAGTGCTGCAGCGCATCCA
GCTGCAGCCTACGTCCATTGAGAAGGAGGTCTTCCCCATTATGGCCAAGGAGGGGCAGCTATATGCCATG
GAGTTACAGGGCTTCTGGATGGACATTGGGCAGCCCAAGGACTTCCTCACTGGCATGTGCCTCTTCCTGC
AGTCACTGAGGCAGAAGCAGCCTGAGCGGCTGTGCTCAGGCCCTGGCATTGTGGGCAACGTGCTGGTGGA
CCCAAGTGCCCGCATCGGCCAGAACTGCAGCATTGGCCCCAATGTGAGCCTGGGACCTGGCGTGGTGGTC
GAAGATGGTGTGTGTATCCGGCGGTGCACGGTGCTGCGGGATGCCCGGATCCGTTCCCATTCCTGGCTTG
AGTCCTGCATTGTGGGCTGGCGCTGCCGCGTGGGTCAGTGGGTACGCATGGAGAACGTGACAGTGCTGGG
TGAGGACGTCATAGTTAATGATGAGCTCTACCTCAACGGAGCCAGCGTGCTGCCCCACAAGTCTATTGGC
GAGTCAGTGCCAGAGCCTCGTATCATCATGTGA

Translation (360 aa):
MKALILVGGYGTRLRPLTLSTPKPLVDFCNKPILLHQVEALAAAGVDHVILAVSYMSQVLEKEMKAQEQR
LGIRISMSHEEEPLGTAGPLALARDLLSETADPFFVLNSDVICDFPFQAMVQFHRHHGQEGSILVTKVEE
PSKYGVVVCEADTGRIHRFVEKPQVFVSNKINAGMYILSPAVLQRIQLQPTSIEKEVFPIMAKEGQLYAM
ELQGFWMDIGQPKDFLTGMCLFLQSLRQKQPERLCSGPGIVGNVLVDPSARIGQNCSIGPNVSLGPGVVV
EDGVCIRRCTVLRDARIRSHSWLESCIVGWRCRVGQWVRMENVTVLGEDVIVNDELYLNGASVLPHKSIG
ESVPEPRIIM


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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